RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ARID3CA6NKF2 412 aa7.34□□□□□ -1.23
CLK1-214ENST00000496205 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
CLK1-214ENST00000496205 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
CLK1-214ENST00000496205 PDE2AO00408 941 aaPredicted RBP7.33□□□□□ -1.24
CLK1-214ENST00000496205 GAS2O43903 313 aaKnown RBP7.33□□□□□ -1.24
CLK1-214ENST00000496205 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
CLK1-214ENST00000496205 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 ZNF438Q7Z4V0 828 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 SLAIN2Q9P270 581 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 CCDC39Q9UFE4 941 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 LEMD3Q9Y2U8 911 aa7.33□□□□□ -1.24
CLK1-214ENST00000496205 SOX1O00570 391 aaPredicted RBP7.32□□□□□ -1.24
CLK1-214ENST00000496205 DLGAP3O95886 979 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 FOSL1P15407 271 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 OGFOD2Q6N063 350 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 ABTB2Q8N961 1025 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 C12orf50Q8NA57 414 aaPredicted RBP7.32□□□□□ -1.24
CLK1-214ENST00000496205 TMPRSS13Q9BYE2 586 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 SEPT3Q9UH03 358 aa7.32□□□□□ -1.24
CLK1-214ENST00000496205 A6NHS1 94 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 TIAF1O95411 115 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 CES1P23141 567 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 RXRBP28702 533 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 JAG1P78504 1218 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 C19orf57Q0VDD7 668 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
CLK1-214ENST00000496205 DRD2P14416 443 aa7.3□□□□□ -1.24
CLK1-214ENST00000496205 NUTM2GQ5VZR2 741 aa7.3□□□□□ -1.24
CLK1-214ENST00000496205 XKR5Q6UX68 686 aa7.3□□□□□ -1.24
CLK1-214ENST00000496205 VN1R5Q7Z5H4 357 aa7.3□□□□□ -1.24
CLK1-214ENST00000496205 OSBPL1AQ9BXW6 950 aa7.3□□□□□ -1.24
CLK1-214ENST00000496205 ANGEL1Q9UNK9 670 aaKnown RBP7.3□□□□□ -1.24
CLK1-214ENST00000496205 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.29□□□□□ -1.24
CLK1-214ENST00000496205 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 PRNPP04156 253 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 ADMP35318 185 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 ARL4DP49703 201 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 TMEM102Q8N9M5 508 aaPredicted RBP7.29□□□□□ -1.24
CLK1-214ENST00000496205 SMG8Q8ND04 991 aaKnown RBP7.29□□□□□ -1.24
CLK1-214ENST00000496205 EDEM1Q92611 657 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 NXPE3Q969Y0 559 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 SUGCTQ9HAC7 445 aa7.29□□□□□ -1.24
CLK1-214ENST00000496205 FAM95CA0A1B0GW59 222 aa7.28□□□□□ -1.24
CLK1-214ENST00000496205 GIMAP7Q8NHV1 300 aa7.28□□□□□ -1.24
CLK1-214ENST00000496205 FBLIM1Q8WUP2 373 aa7.28□□□□□ -1.24
CLK1-214ENST00000496205 CLP1Q92989 425 aaKnown RBP7.28□□□□□ -1.24
CLK1-214ENST00000496205 USP26Q9BXU7 913 aa7.28□□□□□ -1.24
CLK1-214ENST00000496205 ATG7O95352 703 aa7.27□□□□□ -1.25
CLK1-214ENST00000496205 IKBKEQ14164 716 aa7.27□□□□□ -1.25
CLK1-214ENST00000496205 BSNDQ8WZ55 320 aa7.27□□□□□ -1.25
CLK1-214ENST00000496205 OSMRQ99650 979 aa7.27□□□□□ -1.25
CLK1-214ENST00000496205 ZKSCAN3Q9BRR0 538 aa7.27□□□□□ -1.25
CLK1-214ENST00000496205 C8AP07357 584 aa7.26□□□□□ -1.25
CLK1-214ENST00000496205 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
CLK1-214ENST00000496205 PAOXQ6QHF9 649 aa7.26□□□□□ -1.25
CLK1-214ENST00000496205 TP53INP2Q8IXH6 220 aa7.26□□□□□ -1.25
CLK1-214ENST00000496205 C2CD4AQ8NCU7 369 aaPredicted RBP7.26□□□□□ -1.25
CLK1-214ENST00000496205 CYP4F12Q9HCS2 524 aa7.26□□□□□ -1.25
CLK1-214ENST00000496205 FAM170BA6NMN3 283 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 CYP26A1O43174 497 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 PDGFAP04085 211 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 ITGB5P18084 799 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 CPSF6Q16630 551 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLK1-214ENST00000496205 C8orf34Q49A92 452 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 EXOSC6Q5RKV6 272 aaKnown RBP7.25□□□□□ -1.25
CLK1-214ENST00000496205 VSIG10LQ86VR7 867 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 POU5F2Q8N7G0 328 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 GATA6Q92908 595 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 FBXL18Q96ME1 805 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 ARID3AQ99856 593 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 PRKAG2Q9UGJ0 569 aa7.25□□□□□ -1.25
CLK1-214ENST00000496205 EREGO14944 169 aa7.24□□□□□ -1.25
CLK1-214ENST00000496205 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
CLK1-214ENST00000496205 USP11P51784 963 aa7.24□□□□□ -1.25
CLK1-214ENST00000496205 ZAR1Q86SH2 424 aa7.24□□□□□ -1.25
CLK1-214ENST00000496205 TBC1D32Q96NH3 1257 aa7.24□□□□□ -1.25
CLK1-214ENST00000496205 ESRRAP11474 423 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 SOX4Q06945 474 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 HOMEZQ8IX15 550 aa7.23□□□□□ -1.25
CLK1-214ENST00000496205 EZH1Q92800 747 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 PMEPA1Q969W9 287 aa7.23□□□□□ -1.25
CLK1-214ENST00000496205 ASIC4Q96FT7 647 aa7.23□□□□□ -1.25
CLK1-214ENST00000496205 METTL22Q9BUU2 404 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 KRTAP4-9Q9BYQ8 210 aa7.23□□□□□ -1.25
CLK1-214ENST00000496205 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 BSDC1Q9NW68 430 aaPredicted RBP7.23□□□□□ -1.25
CLK1-214ENST00000496205 ATP2B4P23634 1241 aa7.22□□□□□ -1.25
CLK1-214ENST00000496205 ASAP3Q8TDY4 903 aa7.22□□□□□ -1.25
CLK1-214ENST00000496205 SOX17Q9H6I2 414 aaPredicted RBP7.22□□□□□ -1.25
CLK1-214ENST00000496205 MZF1P28698 734 aaPredicted RBP7.21□□□□□ -1.26
CLK1-214ENST00000496205 GSTM4Q03013 218 aa7.21□□□□□ -1.26
CLK1-214ENST00000496205 NOM1Q5C9Z4 860 aaKnown RBP7.21□□□□□ -1.26
CLK1-214ENST00000496205 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
CLK1-214ENST00000496205 FLCNQ8NFG4 579 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms