RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 JAG2Q9Y219 1238 aa24.69■■□□□ 1.54
SMC4-222ENST00000490207 WNT10BO00744 389 aa24.68■■□□□ 1.54
SMC4-222ENST00000490207 SASH1O94885 1247 aa24.68■■□□□ 1.54
SMC4-222ENST00000490207 PDE8BO95263 885 aa24.68■■□□□ 1.54
SMC4-222ENST00000490207 FKBP1AP62942 108 aaKnown RBP24.68■■□□□ 1.54
SMC4-222ENST00000490207 GRM1Q13255 1194 aa24.68■■□□□ 1.54
SMC4-222ENST00000490207 FAM84BQ96KN1 310 aaPredicted RBP24.68■■□□□ 1.54
SMC4-222ENST00000490207 TDRD7Q8NHU6 1098 aaKnown RBP24.67■■□□□ 1.54
SMC4-222ENST00000490207 CDCA5Q96FF9 252 aa24.67■■□□□ 1.54
SMC4-222ENST00000490207 HHIPL1Q96JK4 782 aa24.67■■□□□ 1.54
SMC4-222ENST00000490207 GBA2Q9HCG7 927 aaPredicted RBP24.67■■□□□ 1.54
SMC4-222ENST00000490207 FAM205AQ6ZU69 1335 aa24.66■■□□□ 1.54
SMC4-222ENST00000490207 GNAI3P08754 354 aa24.66■■□□□ 1.54
SMC4-222ENST00000490207 VPS37DQ86XT2 251 aa24.66■■□□□ 1.54
SMC4-222ENST00000490207 CLUAP1Q96AJ1 413 aa24.66■■□□□ 1.54
SMC4-222ENST00000490207 PAPPA2Q9BXP8 1791 aa24.66■■□□□ 1.54
SMC4-222ENST00000490207 F8W031 263 aaPredicted RBP24.65■■□□□ 1.54
SMC4-222ENST00000490207 HUNKP57058 714 aa24.65■■□□□ 1.54
SMC4-222ENST00000490207 PUM3Q15397 648 aaKnown RBP24.65■■□□□ 1.54
SMC4-222ENST00000490207 ZKSCAN2Q63HK3 967 aa24.65■■□□□ 1.54
SMC4-222ENST00000490207 SIL1Q9H173 461 aa24.65■■□□□ 1.54
SMC4-222ENST00000490207 CAVIN4Q5BKX8 364 aa24.64■■□□□ 1.54
SMC4-222ENST00000490207 C2orf69Q8N8R5 385 aa24.64■■□□□ 1.54
SMC4-222ENST00000490207 ZBED3Q96IU2 234 aaPredicted RBP24.64■■□□□ 1.54
SMC4-222ENST00000490207 FBXO3Q9UK99 471 aa24.64■■□□□ 1.54
SMC4-222ENST00000490207 SCAF8Q9UPN6 1271 aaKnown RBP24.64■■□□□ 1.54
SMC4-222ENST00000490207 IFIT1P09914 478 aaKnown RBP24.63■■□□□ 1.53
SMC4-222ENST00000490207 MFSD14BQ5SR56 506 aa24.63■■□□□ 1.53
SMC4-222ENST00000490207 ATG9AQ7Z3C6 839 aa24.63■■□□□ 1.53
SMC4-222ENST00000490207 FBXO33Q7Z6M2 555 aa24.63■■□□□ 1.53
SMC4-222ENST00000490207 AIDAQ96BJ3 306 aa24.63■■□□□ 1.53
SMC4-222ENST00000490207 CIAO1O76071 339 aa24.62■■□□□ 1.53
SMC4-222ENST00000490207 FGFR2P21802 821 aa24.62■■□□□ 1.53
SMC4-222ENST00000490207 DLGAP5Q15398 846 aa24.62■■□□□ 1.53
SMC4-222ENST00000490207 APOBEC3FQ8IUX4 373 aaKnown RBP24.62■■□□□ 1.53
SMC4-222ENST00000490207 IQSEC3Q9UPP2 1182 aaPredicted RBP24.62■■□□□ 1.53
SMC4-222ENST00000490207 FOXN1O15353 648 aa24.61■■□□□ 1.53
SMC4-222ENST00000490207 SLC5A1P13866 664 aa24.61■■□□□ 1.53
SMC4-222ENST00000490207 TMEM57Q8N5G2 664 aa24.61■■□□□ 1.53
SMC4-222ENST00000490207 MTMR14Q8NCE2 650 aa24.61■■□□□ 1.53
SMC4-222ENST00000490207 WBP1LQ9NX94 342 aa24.61■■□□□ 1.53
SMC4-222ENST00000490207 PA2G4Q9UQ80 394 aaKnown RBP24.61■■□□□ 1.53
SMC4-222ENST00000490207 COL1A1P02452 1464 aaPredicted RBP24.61■■□□□ 1.53
SMC4-222ENST00000490207 AOC2O75106 756 aa24.6■■□□□ 1.53
SMC4-222ENST00000490207 FRAT2O75474 233 aaPredicted RBP24.6■■□□□ 1.53
SMC4-222ENST00000490207 MAP2K1Q02750 393 aaPredicted RBP24.6■■□□□ 1.53
SMC4-222ENST00000490207 CHAF1AQ13111 956 aaPredicted RBP24.6■■□□□ 1.53
SMC4-222ENST00000490207 CFAP100Q494V2 611 aa24.6■■□□□ 1.53
SMC4-222ENST00000490207 LPIN2Q92539 896 aa24.6■■□□□ 1.53
SMC4-222ENST00000490207 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
SMC4-222ENST00000490207 BCAMP50895 628 aa24.59■■□□□ 1.53
SMC4-222ENST00000490207 PCDHAC2Q9Y5I4 1007 aa24.59■■□□□ 1.53
SMC4-222ENST00000490207 SRGAP3O43295 1099 aa24.58■■□□□ 1.53
SMC4-222ENST00000490207 GNAI2P04899 355 aa24.58■■□□□ 1.53
SMC4-222ENST00000490207 IL15P40933 162 aaPredicted RBP24.58■■□□□ 1.53
SMC4-222ENST00000490207 MTX1Q13505 466 aa24.58■■□□□ 1.53
SMC4-222ENST00000490207 RGMBQ6NW40 437 aa24.58■■□□□ 1.53
SMC4-222ENST00000490207 FTSJ3Q8IY81 847 aaKnown RBP24.58■■□□□ 1.53
SMC4-222ENST00000490207 CEP126Q9P2H0 1117 aa24.58■■□□□ 1.53
SMC4-222ENST00000490207 TTF2Q9UNY4 1162 aaKnown RBP24.58■■□□□ 1.53
SMC4-222ENST00000490207 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 MYO1BO43795 1136 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 MAP2K2P36507 400 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 RBM5P52756 815 aaKnown RBP eCLIP24.57■■□□□ 1.52
SMC4-222ENST00000490207 ATP2B3Q16720 1220 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 COL13A1Q5TAT6 717 aaPredicted RBP24.57■■□□□ 1.52
SMC4-222ENST00000490207 PRAMEF18Q5VWM3 479 aa24.57■■□□□ 1.52
SMC4-222ENST00000490207 CTCFP49711 727 aaPredicted RBP24.56■■□□□ 1.52
SMC4-222ENST00000490207 FKBP1BP68106 108 aa24.56■■□□□ 1.52
SMC4-222ENST00000490207 TBC1D22AQ8WUA7 517 aa24.56■■□□□ 1.52
SMC4-222ENST00000490207 NF2P35240 595 aa24.55■■□□□ 1.52
SMC4-222ENST00000490207 DZIP1LQ8IYY4 767 aaKnown RBP24.55■■□□□ 1.52
SMC4-222ENST00000490207 CLRN2A0PK11 232 aa24.54■■□□□ 1.52
SMC4-222ENST00000490207 ZNF157P51786 506 aaPredicted RBP24.54■■□□□ 1.52
SMC4-222ENST00000490207 NOGQ13253 232 aa24.54■■□□□ 1.52
SMC4-222ENST00000490207 PRMT6Q96LA8 375 aaPredicted RBP24.54■■□□□ 1.52
SMC4-222ENST00000490207 BEGAINQ9BUH8 593 aa24.54■■□□□ 1.52
SMC4-222ENST00000490207 SERPINA10Q9UK55 444 aa24.54■■□□□ 1.52
SMC4-222ENST00000490207 GRIK5Q16478 980 aa24.53■■□□□ 1.52
SMC4-222ENST00000490207 VEZTQ9HBM0 779 aa24.53■■□□□ 1.52
SMC4-222ENST00000490207 AOX1Q06278 1338 aa24.53■■□□□ 1.52
SMC4-222ENST00000490207 FAM155AB1AL88 458 aaPredicted RBP24.52■■□□□ 1.52
SMC4-222ENST00000490207 TTLL12Q14166 644 aaPredicted RBP24.52■■□□□ 1.52
SMC4-222ENST00000490207 ITPRIPQ8IWB1 547 aa24.52■■□□□ 1.52
SMC4-222ENST00000490207 CCDC102AQ96A19 550 aa24.52■■□□□ 1.52
SMC4-222ENST00000490207 SLC10A3P09131 477 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 HSPA8P11142 646 aaKnown RBP24.51■■□□□ 1.51
SMC4-222ENST00000490207 RLBP1P12271 317 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 CRKP46108 304 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 MOB2Q70IA6 237 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 DEFB129Q9H1M3 183 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 PPP2R3BQ9Y5P8 575 aa24.51■■□□□ 1.51
SMC4-222ENST00000490207 PNMA6EA0A0J9YXQ4 647 aa24.5■■□□□ 1.51
SMC4-222ENST00000490207 ZIC5Q96T25 663 aa24.5■■□□□ 1.51
SMC4-222ENST00000490207 MAST3O60307 1309 aa24.5■■□□□ 1.51
SMC4-222ENST00000490207 LBX1P52954 281 aa24.49■■□□□ 1.51
SMC4-222ENST00000490207 SPDYE2Q495Y8 402 aa24.49■■□□□ 1.51
SMC4-222ENST00000490207 IFFO2Q5TF58 517 aa24.49■■□□□ 1.51
SMC4-222ENST00000490207 RASAL3Q86YV0 1011 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms