RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	RLBP1	P12271	317 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	SLC5A1	P13866	664 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	SCARF1	Q14162	830 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	FBXO33	Q7Z6M2	555 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	KIAA0825	Q8IV33	1275 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	TDRD7	Q8NHU6	1098 aa	Known RBP	13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	LPIN2	Q92539	896 aa		13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	PA2G4	Q9UQ80	394 aa	Known RBP	13.78	□□□□□ -0.2
GGA1-222	ENST00000489772	FRAT2	O75474	233 aa	Predicted RBP	13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	FGFR2	P21802	821 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	FKBP1A	P62942	108 aa	Known RBP	13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	KRT26	Q7Z3Y9	468 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	USP48	Q86UV5	1035 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	SULF1	Q8IWU6	871 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	GGA3	Q9NZ52	723 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	ABT1	Q9ULW3	272 aa	Known RBP	13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	JAG2	Q9Y219	1238 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	SCN9A	Q15858	1988 aa		13.77	□□□□□ -0.21
GGA1-222	ENST00000489772	ZBTB7B	O15156	539 aa	Predicted RBP	13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	BCAM	P50895	628 aa		13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	FMR1	Q06787	632 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	ANGEL2	Q5VTE6	544 aa	Known RBP	13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	CERS5	Q8N5B7	392 aa		13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	PANK1	Q8TE04	598 aa		13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	FAM205A	Q6ZU69	1335 aa		13.76	□□□□□ -0.21
GGA1-222	ENST00000489772	CELF2	O95319	508 aa	Known RBP	13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	ATP2B3	Q16720	1220 aa		13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	MFSD14B	Q5SR56	506 aa		13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	CST9	Q5W186	159 aa		13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	ZNF408	Q9H9D4	720 aa		13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	MKRN1	Q9UHC7	482 aa	Known RBP	13.75	□□□□□ -0.21
GGA1-222	ENST00000489772	PNMA6E	A0A0J9YXQ4	647 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	ADM5	C9JUS6	153 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772		F8W031	263 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	NBPF9	Q3BBW0	867 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	TBC1D22A	Q8WUA7	517 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	C1orf115	Q9H7X2	142 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	ASTN2	O75129	1339 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	PITPNM2	Q9BZ72	1349 aa		13.74	□□□□□ -0.21
GGA1-222	ENST00000489772	WNT10B	O00744	389 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	ATP8B2	P98198	1209 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	CHAF1A	Q13111	956 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	DLGAP5	Q15398	846 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	DEFB115	Q30KQ5	88 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	JMY	Q8N9B5	988 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	GNL3L	Q9NVN8	582 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	AKAP2	Q9Y2D5	859 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	CNTNAP1	P78357	1384 aa		13.73	□□□□□ -0.21
GGA1-222	ENST00000489772	RASSF10	A6NK89	507 aa		13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	TFCP2	Q12800	502 aa		13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	POLA2	Q14181	598 aa		13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	MVP	Q14764	893 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	MTMR14	Q8NCE2	650 aa		13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	YTHDC1	Q96MU7	727 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	CHMP4B	Q9H444	224 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-222	ENST00000489772	TTF2	Q9UNY4	1162 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-222	ENST00000489772		A0A1B0GUL6	1792 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	MYO1B	O43795	1136 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	RBM5	P52756	815 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	CFAP100	Q494V2	611 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	DLK2	Q6UY11	383 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	SSH3	Q8TE77	659 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	SERPINA10	Q9UK55	444 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	DDX19B	Q9UMR2	479 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	TLL2	Q9Y6L7	1015 aa		13.71	□□□□□ -0.21
GGA1-222	ENST00000489772	PSME4	Q14997	1843 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	TIMM10	P62072	90 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	OS9	Q13438	667 aa	Predicted RBP	13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	SAPCD2	Q86UD0	394 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	WDR66	Q8TBY9	1149 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	CDCA5	Q96FF9	252 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	ZBED3	Q96IU2	234 aa	Predicted RBP	13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	COG6	Q9Y2V7	657 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	SUGT1	Q9Y2Z0	365 aa		13.71	□□□□□ -0.22
GGA1-222	ENST00000489772	PCNT	O95613	3336 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772		A0A1B0GUL7	405 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	SPDYE2B	A6NHP3	402 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	SEMA3E	O15041	775 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	SURF6	O75683	361 aa	Known RBP	13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	SPDYE6	P0CI01	402 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	ADORA1	P30542	326 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	ECE1	P42892	770 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	VEGFB	P49765	207 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	PDE3A	Q14432	1141 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	CEP85	Q6P2H3	762 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	CHRDL2	Q6WN34	429 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	C2orf69	Q8N8R5	385 aa		13.7	□□□□□ -0.22
GGA1-222	ENST00000489772	CCDC102B	Q68D86	513 aa		13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	XAGE2	Q96GT9	111 aa		13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	HHIPL1	Q96JK4	782 aa		13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	PRMT6	Q96LA8	375 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	NEUROD6	Q96NK8	337 aa		13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	GBA2	Q9HCG7	927 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	DENND2A	Q9ULE3	1009 aa		13.69	□□□□□ -0.22
GGA1-222	ENST00000489772	SCAF8	Q9UPN6	1271 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms