RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
GGA1-222ENST00000489772 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
GGA1-222ENST00000489772 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
GGA1-222ENST00000489772 ABCC9O60706 1549 aa23.57■■□□□ 1.36
GGA1-222ENST00000489772 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
GGA1-222ENST00000489772 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.22
GGA1-222ENST00000489772 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
GGA1-222ENST00000489772 NACADO15069 1562 aa22.57■■□□□ 1.2
GGA1-222ENST00000489772 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
GGA1-222ENST00000489772 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
GGA1-222ENST00000489772 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.16
GGA1-222ENST00000489772 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
GGA1-222ENST00000489772 UNC13AQ9UPW8 1703 aa21.95■■□□□ 1.1
GGA1-222ENST00000489772 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
GGA1-222ENST00000489772 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
GGA1-222ENST00000489772 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
GGA1-222ENST00000489772 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
GGA1-222ENST00000489772 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
GGA1-222ENST00000489772 CC2D2AQ9P2K1 1620 aa21.27■□□□□ 0.99
GGA1-222ENST00000489772 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
GGA1-222ENST00000489772 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
GGA1-222ENST00000489772 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
GGA1-222ENST00000489772 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
GGA1-222ENST00000489772 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
GGA1-222ENST00000489772 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
GGA1-222ENST00000489772 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
GGA1-222ENST00000489772 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
GGA1-222ENST00000489772 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
GGA1-222ENST00000489772 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
GGA1-222ENST00000489772 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
GGA1-222ENST00000489772 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
GGA1-222ENST00000489772 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
GGA1-222ENST00000489772 WIZO95785 1651 aa20.48■□□□□ 0.87
GGA1-222ENST00000489772 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
GGA1-222ENST00000489772 NESP48681 1621 aa20.35■□□□□ 0.85
GGA1-222ENST00000489772 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
GGA1-222ENST00000489772 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
GGA1-222ENST00000489772 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.83
GGA1-222ENST00000489772 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
GGA1-222ENST00000489772 CUX2O14529 1486 aa20.15■□□□□ 0.82
GGA1-222ENST00000489772 CFTRP13569 1480 aa20.1■□□□□ 0.81
GGA1-222ENST00000489772 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.8
GGA1-222ENST00000489772 KIF21AQ7Z4S6 1674 aa20.02■□□□□ 0.8
GGA1-222ENST00000489772 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
GGA1-222ENST00000489772 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
GGA1-222ENST00000489772 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
GGA1-222ENST00000489772 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
GGA1-222ENST00000489772 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
GGA1-222ENST00000489772 WDR62O43379 1518 aa19.89■□□□□ 0.78
GGA1-222ENST00000489772 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
GGA1-222ENST00000489772 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
GGA1-222ENST00000489772 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
GGA1-222ENST00000489772 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
GGA1-222ENST00000489772 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
GGA1-222ENST00000489772 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
GGA1-222ENST00000489772 IFT140Q96RY7 1462 aa19.58■□□□□ 0.73
GGA1-222ENST00000489772 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
GGA1-222ENST00000489772 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
GGA1-222ENST00000489772 CUX1P39880 1505 aa19.46■□□□□ 0.71
GGA1-222ENST00000489772 SOGA1O94964 1423 aa19.45■□□□□ 0.7
GGA1-222ENST00000489772 FOXD1Q16676 465 aa19.44■□□□□ 0.7
GGA1-222ENST00000489772 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
GGA1-222ENST00000489772 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
GGA1-222ENST00000489772 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
GGA1-222ENST00000489772 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.69
GGA1-222ENST00000489772 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
GGA1-222ENST00000489772 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
GGA1-222ENST00000489772 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
GGA1-222ENST00000489772 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
GGA1-222ENST00000489772 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
GGA1-222ENST00000489772 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
GGA1-222ENST00000489772 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
GGA1-222ENST00000489772 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
GGA1-222ENST00000489772 FBLN2P98095 1184 aa19.22■□□□□ 0.67
GGA1-222ENST00000489772 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
GGA1-222ENST00000489772 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
GGA1-222ENST00000489772 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
GGA1-222ENST00000489772 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
GGA1-222ENST00000489772 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
GGA1-222ENST00000489772 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
GGA1-222ENST00000489772 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
GGA1-222ENST00000489772 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
GGA1-222ENST00000489772 CHD1O14646 1710 aa19.07■□□□□ 0.64
GGA1-222ENST00000489772 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
GGA1-222ENST00000489772 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
GGA1-222ENST00000489772 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
GGA1-222ENST00000489772 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
GGA1-222ENST00000489772 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
GGA1-222ENST00000489772 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
GGA1-222ENST00000489772 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
GGA1-222ENST00000489772 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
GGA1-222ENST00000489772 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
GGA1-222ENST00000489772 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
GGA1-222ENST00000489772 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
GGA1-222ENST00000489772 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
GGA1-222ENST00000489772 IGF1RP08069 1367 aa18.9■□□□□ 0.62
GGA1-222ENST00000489772 NUP160Q12769 1436 aa18.87■□□□□ 0.61
GGA1-222ENST00000489772 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
GGA1-222ENST00000489772 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
GGA1-222ENST00000489772 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms