RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 KCNJ4P48050 445 aa23.97■■□□□ 1.43
GMDS-204ENST00000476972 ANKRD44Q8N8A2 993 aa23.97■■□□□ 1.43
GMDS-204ENST00000476972 MYO3BQ8WXR4 1341 aa23.97■■□□□ 1.43
GMDS-204ENST00000476972 TAF5LO75529 589 aa23.96■■□□□ 1.43
GMDS-204ENST00000476972 LDHAL6AQ6ZMR3 332 aa23.96■■□□□ 1.43
GMDS-204ENST00000476972 HELBQ8NG08 1087 aaPredicted RBP23.96■■□□□ 1.43
GMDS-204ENST00000476972 CASP8AP2Q9UKL3 1982 aa23.96■■□□□ 1.43
GMDS-204ENST00000476972 ZBED9Q6R2W3 1325 aa23.95■■□□□ 1.42
GMDS-204ENST00000476972 POLR2AP24928 1970 aaKnown RBP23.95■■□□□ 1.42
GMDS-204ENST00000476972 SNAP23O00161 211 aa23.95■■□□□ 1.42
GMDS-204ENST00000476972 SASH1O94885 1247 aa23.95■■□□□ 1.42
GMDS-204ENST00000476972 CNNM1Q9NRU3 951 aa23.95■■□□□ 1.42
GMDS-204ENST00000476972 MMP14P50281 582 aa23.94■■□□□ 1.42
GMDS-204ENST00000476972 GTF2IP78347 998 aa23.94■■□□□ 1.42
GMDS-204ENST00000476972 TTLL12Q14166 644 aaPredicted RBP23.94■■□□□ 1.42
GMDS-204ENST00000476972 KIAA0825Q8IV33 1275 aa23.94■■□□□ 1.42
GMDS-204ENST00000476972 IRS2Q9Y4H2 1338 aa23.93■■□□□ 1.42
GMDS-204ENST00000476972 ARHGAP45Q92619 1136 aa23.92■■□□□ 1.42
GMDS-204ENST00000476972 PUS3Q9BZE2 481 aaKnown RBP23.92■■□□□ 1.42
GMDS-204ENST00000476972 HDAC9Q9UKV0 1011 aa23.92■■□□□ 1.42
GMDS-204ENST00000476972 PLIN1O60240 522 aa23.91■■□□□ 1.42
GMDS-204ENST00000476972 BCAR3O75815 825 aa23.91■■□□□ 1.42
GMDS-204ENST00000476972 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
GMDS-204ENST00000476972 NF2P35240 595 aa23.9■■□□□ 1.42
GMDS-204ENST00000476972 C15orf52Q6ZUT6 534 aaKnown RBP23.9■■□□□ 1.42
GMDS-204ENST00000476972 CTU1Q7Z7A3 348 aaKnown RBP23.9■■□□□ 1.42
GMDS-204ENST00000476972 ZBED3Q96IU2 234 aaPredicted RBP23.9■■□□□ 1.42
GMDS-204ENST00000476972 TBC1D8O95759 1140 aa23.89■■□□□ 1.41
GMDS-204ENST00000476972 UBTFL1P0CB47 393 aaPredicted RBP23.89■■□□□ 1.41
GMDS-204ENST00000476972 PTPN12Q05209 780 aaKnown RBP23.89■■□□□ 1.41
GMDS-204ENST00000476972 PRKG1Q13976 671 aa23.89■■□□□ 1.41
GMDS-204ENST00000476972 TRIM27P14373 513 aa23.88■■□□□ 1.41
GMDS-204ENST00000476972 TM4SF4P48230 202 aa23.88■■□□□ 1.41
GMDS-204ENST00000476972 MKRN3Q13064 507 aaKnown RBP23.88■■□□□ 1.41
GMDS-204ENST00000476972 APOBEC3FQ8IUX4 373 aaKnown RBP23.88■■□□□ 1.41
GMDS-204ENST00000476972 RIPOR2Q9Y4F9 1068 aa23.88■■□□□ 1.41
GMDS-204ENST00000476972 LRRC24Q50LG9 513 aa23.87■■□□□ 1.41
GMDS-204ENST00000476972 INTS3Q68E01 1043 aaKnown RBP23.87■■□□□ 1.41
GMDS-204ENST00000476972 CERS5Q8N5B7 392 aa23.87■■□□□ 1.41
GMDS-204ENST00000476972 KLHDC4Q8TBB5 520 aa23.87■■□□□ 1.41
GMDS-204ENST00000476972 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
GMDS-204ENST00000476972 MEIS3Q99687 375 aa23.87■■□□□ 1.41
GMDS-204ENST00000476972 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
GMDS-204ENST00000476972 MROH5Q6ZUA9 1318 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 PAPPA2Q9BXP8 1791 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
GMDS-204ENST00000476972 DLGAP5Q15398 846 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 ATF7IPQ6VMQ6 1270 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 ARMC9Q7Z3E5 817 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 ZNF804AQ7Z570 1209 aa23.86■■□□□ 1.41
GMDS-204ENST00000476972 SOX10P56693 466 aa23.85■■□□□ 1.41
GMDS-204ENST00000476972 UBE4AQ14139 1066 aa23.85■■□□□ 1.41
GMDS-204ENST00000476972 LDLRAD1Q5T700 205 aa23.85■■□□□ 1.41
GMDS-204ENST00000476972 ZNF296Q8WUU4 475 aaPredicted RBP23.85■■□□□ 1.41
GMDS-204ENST00000476972 DEFB129Q9H1M3 183 aa23.85■■□□□ 1.41
GMDS-204ENST00000476972 LRRFIP2Q9Y608 721 aaKnown RBP23.85■■□□□ 1.41
GMDS-204ENST00000476972 RFX5P48382 616 aaPredicted RBP23.84■■□□□ 1.41
GMDS-204ENST00000476972 METTL24Q5JXM2 366 aa23.84■■□□□ 1.41
GMDS-204ENST00000476972 FZD1Q9UP38 647 aa23.84■■□□□ 1.41
GMDS-204ENST00000476972 PCDHAC2Q9Y5I4 1007 aa23.84■■□□□ 1.41
GMDS-204ENST00000476972 F8W031 263 aaPredicted RBP23.83■■□□□ 1.41
GMDS-204ENST00000476972 IL1R1P14778 569 aa23.83■■□□□ 1.41
GMDS-204ENST00000476972 MTMR14Q8NCE2 650 aa23.83■■□□□ 1.41
GMDS-204ENST00000476972 ANGEL1Q9UNK9 670 aaKnown RBP23.83■■□□□ 1.41
GMDS-204ENST00000476972 VGLL2Q8N8G2 317 aa23.82■■□□□ 1.4
GMDS-204ENST00000476972 CLUAP1Q96AJ1 413 aa23.82■■□□□ 1.4
GMDS-204ENST00000476972 GPR25O00155 361 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 SREBF2Q12772 1141 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 HPS5Q9UPZ3 1129 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 HDAC5Q9UQL6 1122 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 JAG2Q9Y219 1238 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 ARAP2Q8WZ64 1704 aa23.81■■□□□ 1.4
GMDS-204ENST00000476972 GYG1P46976 350 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 CFAP100Q494V2 611 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 SPRYD7Q5W111 196 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 ZKSCAN2Q63HK3 967 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 SLC10A4Q96EP9 437 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 PRMT6Q96LA8 375 aaPredicted RBP23.8■■□□□ 1.4
GMDS-204ENST00000476972 R3HDMLQ9H3Y0 253 aa23.8■■□□□ 1.4
GMDS-204ENST00000476972 CLRN2A0PK11 232 aa23.79■■□□□ 1.4
GMDS-204ENST00000476972 EYA2O00167 538 aa23.79■■□□□ 1.4
GMDS-204ENST00000476972 PDE8BO95263 885 aa23.79■■□□□ 1.4
GMDS-204ENST00000476972 SLC34A2O95436 690 aa23.79■■□□□ 1.4
GMDS-204ENST00000476972 GNAI3P08754 354 aa23.79■■□□□ 1.4
GMDS-204ENST00000476972 PKN2Q16513 984 aaKnown RBP23.79■■□□□ 1.4
GMDS-204ENST00000476972 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.79■■□□□ 1.4
GMDS-204ENST00000476972 SPDYE2BA6NHP3 402 aa23.78■■□□□ 1.4
GMDS-204ENST00000476972 SPDYE6P0CI01 402 aa23.78■■□□□ 1.4
GMDS-204ENST00000476972 FKBP1AP62942 108 aaKnown RBP23.78■■□□□ 1.4
GMDS-204ENST00000476972 NOM1Q5C9Z4 860 aaKnown RBP23.78■■□□□ 1.4
GMDS-204ENST00000476972 FAM84BQ96KN1 310 aaPredicted RBP23.78■■□□□ 1.4
GMDS-204ENST00000476972 MYO1BO43795 1136 aa23.77■■□□□ 1.4
GMDS-204ENST00000476972 PPP1R12BO60237 982 aaPredicted RBP23.77■■□□□ 1.4
GMDS-204ENST00000476972 HIBADHP31937 336 aaKnown RBP23.77■■□□□ 1.4
GMDS-204ENST00000476972 TMEM57Q8N5G2 664 aa23.77■■□□□ 1.4
GMDS-204ENST00000476972 SIL1Q9H173 461 aa23.77■■□□□ 1.4
GMDS-204ENST00000476972 AOX1Q06278 1338 aa23.77■■□□□ 1.4
GMDS-204ENST00000476972 RBM5P52756 815 aaKnown RBP eCLIP23.76■■□□□ 1.39
GMDS-204ENST00000476972 MAP3K11Q16584 847 aa23.76■■□□□ 1.39
GMDS-204ENST00000476972 SUPT20HL1Q3ZLR7 823 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1414.5 ms