RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 UTRNP46939 3433 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 DIP2AQ14689 1571 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 AHDC1Q5TGY3 1603 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-215ENST00000476664 A6NHS1 94 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 TNFRSF21O75509 655 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 VIL1P09327 827 aaKnown RBP8.99□□□□□ -0.97
LRCH3-215ENST00000476664 HCLS1P14317 486 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-215ENST00000476664 GBP2P32456 591 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-215ENST00000476664 TLR1Q15399 786 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 USPL1Q5W0Q7 1092 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 NXPE4Q6UWF7 544 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 EAF1Q96JC9 268 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-215ENST00000476664 TMEM74Q96NL1 305 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 CDC42BPBQ9Y5S2 1711 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
LRCH3-215ENST00000476664 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 COPS2P61201 443 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 SH3BP2P78314 561 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 EXOSC10Q01780 885 aaKnown RBP8.98□□□□□ -0.97
LRCH3-215ENST00000476664 HSP90AB4PQ58FF6 505 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 TSHZ1Q6ZSZ6 1077 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 KRT26Q7Z3Y9 468 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 ZNF296Q8WUU4 475 aaPredicted RBP8.98□□□□□ -0.97
LRCH3-215ENST00000476664 RPS6KC1Q96S38 1066 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 SRRTQ9BXP5 876 aaKnown RBP8.98□□□□□ -0.97
LRCH3-215ENST00000476664 KANSL2Q9H9L4 492 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 PPP4R2Q9NY27 417 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 HCN4Q9Y3Q4 1203 aa8.98□□□□□ -0.97
LRCH3-215ENST00000476664 MIA2Q96PC5 1412 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 PZPP20742 1482 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 MINDY4BA8MYZ0 360 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 KIF3BO15066 747 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 GADD45BO75293 160 aaPredicted RBP8.97□□□□□ -0.97
LRCH3-215ENST00000476664 CBLBQ13191 982 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 RASGRF1Q13972 1273 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 SYNPOQ8N3V7 929 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 SLC6A16Q9GZN6 736 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 ZFYVE28Q9HCC9 887 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
LRCH3-215ENST00000476664 SUPT16HQ9Y5B9 1047 aaKnown RBP8.97□□□□□ -0.97
LRCH3-215ENST00000476664 EID1Q9Y6B2 187 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 MSH6P52701 1360 aa8.97□□□□□ -0.97
LRCH3-215ENST00000476664 SCAF11Q99590 1463 aaKnown RBP8.96□□□□□ -0.97
LRCH3-215ENST00000476664 SAMD9LQ8IVG5 1584 aa8.96□□□□□ -0.97
LRCH3-215ENST00000476664 PDPK1O15530 556 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.98
LRCH3-215ENST00000476664 OS9Q13438 667 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-215ENST00000476664 TCEA2Q15560 299 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 CCDC85BQ15834 202 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-215ENST00000476664 HIF1AQ16665 826 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 PCNX4Q63HM2 1172 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 NPHS2Q9NP85 383 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 TMPRSS4Q9NRS4 437 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 CNTN3Q9P232 1028 aa8.96□□□□□ -0.98
LRCH3-215ENST00000476664 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-215ENST00000476664 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
LRCH3-215ENST00000476664 PLIN1O60240 522 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 PHACTR2O75167 634 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 DDR2Q16832 855 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 C1orf53Q5VUE5 145 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 A2MP01023 1474 aa8.95□□□□□ -0.98
LRCH3-215ENST00000476664 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-215ENST00000476664 KDM5AP29375 1690 aaKnown RBP8.94□□□□□ -0.98
LRCH3-215ENST00000476664 CAMTA1Q9Y6Y1 1673 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 TLL1O43897 1013 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 LTKP29376 864 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 BCAMP50895 628 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 C2orf27AQ580R0 203 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
LRCH3-215ENST00000476664 SH3PXD2AQ5TCZ1 1133 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 PDE12Q6L8Q7 609 aaKnown RBP8.94□□□□□ -0.98
LRCH3-215ENST00000476664 ZNF438Q7Z4V0 828 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 THAP3Q8WTV1 239 aaPredicted RBP8.94□□□□□ -0.98
LRCH3-215ENST00000476664 SUV39H2Q9H5I1 410 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 KCNQ5Q9NR82 932 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 RAB6BQ9NRW1 208 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 PLAAQ9Y263 795 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 USP3Q9Y6I4 520 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 ABCC3O15438 1527 aa8.94□□□□□ -0.98
LRCH3-215ENST00000476664 KCNA6P17658 529 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 CNGA1P29973 690 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 SQSTM1Q13501 440 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 R3HDM1Q15032 1099 aaKnown RBP8.93□□□□□ -0.98
LRCH3-215ENST00000476664 C4orf46Q504U0 113 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 ZDHHC1Q8WTX9 485 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 TRPC5Q9UL62 973 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-215ENST00000476664 TRAK1Q9UPV9 953 aa8.93□□□□□ -0.98
LRCH3-215ENST00000476664 THRAP3Q9Y2W1 955 aaKnown RBP8.93□□□□□ -0.98
LRCH3-215ENST00000476664 COMMD10Q9Y6G5 202 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms