RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
HDAC3-203ENST00000467533 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
HDAC3-203ENST00000467533 GNRH1P01148 92 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 GJA8P48165 433 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
HDAC3-203ENST00000467533 GTF2IP78347 998 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
HDAC3-203ENST00000467533 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
HDAC3-203ENST00000467533 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
HDAC3-203ENST00000467533 EVI5O60447 810 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 CCL5P13501 91 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 GTF2A2P52657 109 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 Q7L0L9 218 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
HDAC3-203ENST00000467533 TLR2O60603 784 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 GJB1P08034 283 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 GRK4P32298 578 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 TXNRD3Q86VQ6 643 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 RAET1EQ8TD07 263 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 JARID2Q92833 1246 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-203ENST00000467533 RNF208Q9H0X6 261 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-203ENST00000467533 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
HDAC3-203ENST00000467533 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-203ENST00000467533 PCCAP05165 728 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-203ENST00000467533 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
HDAC3-203ENST00000467533 CFAP100Q494V2 611 aa13.31□□□□□ -0.28
HDAC3-203ENST00000467533 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
HDAC3-203ENST00000467533 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDAC3-203ENST00000467533 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
HDAC3-203ENST00000467533 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
HDAC3-203ENST00000467533 BIN2Q9UBW5 565 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-203ENST00000467533 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
HDAC3-203ENST00000467533 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 KLRK1P26718 216 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 UBXN2AP68543 259 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 RASA3Q14644 834 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 MYD88Q99836 296 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-203ENST00000467533 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 SRRDQ9UH36 339 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 RIPOR2Q9Y4F9 1068 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 CSADQ9Y600 493 aa13.3□□□□□ -0.28
HDAC3-203ENST00000467533 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 PSMC4P43686 418 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 CTSWP56202 376 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 RIPK4P57078 832 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 VGLL4Q14135 290 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
HDAC3-203ENST00000467533 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
HDAC3-203ENST00000467533 MGAMO43451 1857 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 OSBPP22059 807 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 HOXD10P28358 340 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 KCNJ4P48050 445 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 CWC25Q9NXE8 425 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
HDAC3-203ENST00000467533 AOX1Q06278 1338 aa13.28□□□□□ -0.28
HDAC3-203ENST00000467533 A0A1B0GUL6 1792 aa13.27□□□□□ -0.28
HDAC3-203ENST00000467533 BTBD19C9JJ37 291 aa13.27□□□□□ -0.29
HDAC3-203ENST00000467533 CETPP11597 493 aa13.27□□□□□ -0.29
HDAC3-203ENST00000467533 CTGFP29279 349 aa13.27□□□□□ -0.29
HDAC3-203ENST00000467533 GREM2Q9H772 168 aa13.27□□□□□ -0.29
HDAC3-203ENST00000467533 HOXB7P09629 217 aa13.26□□□□□ -0.29
HDAC3-203ENST00000467533 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
HDAC3-203ENST00000467533 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
HDAC3-203ENST00000467533 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
HDAC3-203ENST00000467533 CD209Q9NNX6 404 aa13.26□□□□□ -0.29
HDAC3-203ENST00000467533 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
HDAC3-203ENST00000467533 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 SGPL1O95470 568 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 BMP8BP34820 402 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 BCAMP50895 628 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 C7orf61Q8IZ16 206 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 SLAIN1Q8ND83 568 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-203ENST00000467533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms