RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ABI2Q9NYB9 513 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-207ENST00000461636 FAM177BA6PVY3 158 aa8.65□□□□□ -1.02
THUMPD3-207ENST00000461636 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
THUMPD3-207ENST00000461636 ALX3O95076 343 aa8.65□□□□□ -1.02
THUMPD3-207ENST00000461636 GLB1P16278 677 aa8.65□□□□□ -1.02
THUMPD3-207ENST00000461636 CEP135Q66GS9 1140 aa8.65□□□□□ -1.02
THUMPD3-207ENST00000461636 CFAP43Q8NDM7 1665 aa8.65□□□□□ -1.03
THUMPD3-207ENST00000461636 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.03
THUMPD3-207ENST00000461636 ATP11AP98196 1134 aa8.64□□□□□ -1.03
THUMPD3-207ENST00000461636 Q6ZS46 218 aa8.64□□□□□ -1.03
THUMPD3-207ENST00000461636 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
THUMPD3-207ENST00000461636 MAGI3Q5TCQ9 1506 aa8.64□□□□□ -1.03
THUMPD3-207ENST00000461636 CCDC18Q5T9S5 1454 aa8.64□□□□□ -1.03
THUMPD3-207ENST00000461636 KIF4AO95239 1232 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 FSTP19883 344 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 CDC27P30260 824 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 COL13A1Q5TAT6 717 aaPredicted RBP8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 PDE12Q6L8Q7 609 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 FAM117BQ6P1L5 589 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 NCAPG2Q86XI2 1143 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
THUMPD3-207ENST00000461636 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 LINC01387J3KSC0 135 aa8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 CD68P34810 354 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 AGGF1Q8N302 714 aaeCLIP8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 CEP41Q9BYV8 373 aa8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
THUMPD3-207ENST00000461636 GSC2O15499 205 aa8.61□□□□□ -1.03
THUMPD3-207ENST00000461636 PBX4Q9BYU1 374 aa8.61□□□□□ -1.03
THUMPD3-207ENST00000461636 TSPOAP1O95153 1857 aa8.61□□□□□ -1.03
THUMPD3-207ENST00000461636 TTC37Q6PGP7 1564 aa8.61□□□□□ -1.03
THUMPD3-207ENST00000461636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 ZBTB39O15060 712 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 PCSK2P16519 638 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 PTPRAP18433 802 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 ACAD11Q709F0 780 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 ZNF438Q7Z4V0 828 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 KIF14Q15058 1648 aa8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 TROQ12816 1431 aaPredicted RBP8.6□□□□□ -1.03
THUMPD3-207ENST00000461636 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
THUMPD3-207ENST00000461636 TXNDC11Q6PKC3 985 aa8.59□□□□□ -1.03
THUMPD3-207ENST00000461636 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
THUMPD3-207ENST00000461636 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
THUMPD3-207ENST00000461636 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
THUMPD3-207ENST00000461636 TIAM1Q13009 1591 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 FSCN2O14926 492 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 DHX15O43143 795 aaKnown RBP8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 CDC25BP30305 580 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 CABP4P57796 275 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 PCMTD2Q9NV79 361 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 SEPT3Q9UH03 358 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 ARAP3Q8WWN8 1544 aa8.58□□□□□ -1.04
THUMPD3-207ENST00000461636 CEP120Q8N960 986 aa8.57□□□□□ -1.04
THUMPD3-207ENST00000461636 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
THUMPD3-207ENST00000461636 TMEM63CQ9P1W3 806 aa8.57□□□□□ -1.04
THUMPD3-207ENST00000461636 STOML1Q9UBI4 398 aa8.57□□□□□ -1.04
THUMPD3-207ENST00000461636 CD109Q6YHK3 1445 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 WISP1O95388 367 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 EPHA1P21709 976 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 DUOXA2Q1HG44 320 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
THUMPD3-207ENST00000461636 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 CDC42BPAQ5VT25 1732 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 MYO5CQ9NQX4 1742 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 CDC42BPBQ9Y5S2 1711 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 PLEKHD1A6NEE1 506 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 H3BRJ5 948 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 ATCAYQ86WG3 371 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 WNT8BQ93098 351 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 ADAM19Q9H013 955 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 SLAIN2Q9P270 581 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 TEX14Q8IWB6 1497 aa8.55□□□□□ -1.04
THUMPD3-207ENST00000461636 PREX2Q70Z35 1606 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 NEO1Q92859 1461 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 CES1P23141 567 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 EDEM1Q92611 657 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
THUMPD3-207ENST00000461636 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
THUMPD3-207ENST00000461636 PMEPA1Q969W9 287 aa8.53□□□□□ -1.04
THUMPD3-207ENST00000461636 PLCH2O75038 1416 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms