RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FKBP1AP62942 108 aaKnown RBP29.4■■■□□ 2.3
VARS-217ENST00000440048 SCARF1Q14162 830 aa29.4■■■□□ 2.3
VARS-217ENST00000440048 USP48Q86UV5 1035 aa29.4■■■□□ 2.3
VARS-217ENST00000440048 LPIN2Q92539 896 aa29.4■■■□□ 2.3
VARS-217ENST00000440048 PNMA6EA0A0J9YXQ4 647 aa29.39■■■□□ 2.3
VARS-217ENST00000440048 MS4A1P11836 297 aa29.39■■■□□ 2.3
VARS-217ENST00000440048 SLC5A1P13866 664 aa29.39■■■□□ 2.3
VARS-217ENST00000440048 DCPSQ96C86 337 aaKnown RBP29.39■■■□□ 2.3
VARS-217ENST00000440048 GGA3Q9NZ52 723 aa29.39■■■□□ 2.3
VARS-217ENST00000440048 BCAMP50895 628 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 CST9Q5W186 159 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 KRT26Q7Z3Y9 468 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 C1orf115Q9H7X2 142 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 HDAC9Q9UKV0 1011 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 IQSEC3Q9UPP2 1182 aaPredicted RBP29.38■■■□□ 2.29
VARS-217ENST00000440048 CNTNAP1P78357 1384 aa29.38■■■□□ 2.29
VARS-217ENST00000440048 MKRN1Q9UHC7 482 aaKnown RBP29.37■■■□□ 2.29
VARS-217ENST00000440048 ATP2B3Q16720 1220 aa29.36■■■□□ 2.29
VARS-217ENST00000440048 NBPF9Q3BBW0 867 aa29.36■■■□□ 2.29
VARS-217ENST00000440048 ANGEL2Q5VTE6 544 aaKnown RBP29.36■■■□□ 2.29
VARS-217ENST00000440048 DLK2Q6UY11 383 aa29.36■■■□□ 2.29
VARS-217ENST00000440048 ADM5C9JUS6 153 aa29.35■■■□□ 2.29
VARS-217ENST00000440048 F8W031 263 aaPredicted RBP29.34■■■□□ 2.29
VARS-217ENST00000440048 WNT10BO00744 389 aa29.34■■■□□ 2.29
VARS-217ENST00000440048 CELF2O95319 508 aaKnown RBP29.34■■■□□ 2.29
VARS-217ENST00000440048 ATP8B2P98198 1209 aa29.34■■■□□ 2.29
VARS-217ENST00000440048 MFSD14BQ5SR56 506 aa29.34■■■□□ 2.29
VARS-217ENST00000440048 FRAT2O75474 233 aaPredicted RBP29.33■■■□□ 2.29
VARS-217ENST00000440048 POLA2Q14181 598 aa29.33■■■□□ 2.29
VARS-217ENST00000440048 SULF1Q8IWU6 871 aa29.33■■■□□ 2.29
VARS-217ENST00000440048 ABT1Q9ULW3 272 aaKnown RBP29.33■■■□□ 2.29
VARS-217ENST00000440048 ARAP2Q8WZ64 1704 aa29.33■■■□□ 2.29
VARS-217ENST00000440048 PITPNM2Q9BZ72 1349 aa29.32■■■□□ 2.28
VARS-217ENST00000440048 CHAF1AQ13111 956 aaPredicted RBP29.32■■■□□ 2.28
VARS-217ENST00000440048 ZBED3Q96IU2 234 aaPredicted RBP29.32■■■□□ 2.28
VARS-217ENST00000440048 YTHDC1Q96MU7 727 aaKnown RBP29.32■■■□□ 2.28
VARS-217ENST00000440048 ZNF408Q9H9D4 720 aa29.32■■■□□ 2.28
VARS-217ENST00000440048 MYH13Q9UKX3 1938 aa29.32■■■□□ 2.28
VARS-217ENST00000440048 RASSF10A6NK89 507 aa29.31■■■□□ 2.28
VARS-217ENST00000440048 TFCP2Q12800 502 aa29.31■■■□□ 2.28
VARS-217ENST00000440048 DEFB115Q30KQ5 88 aa29.31■■■□□ 2.28
VARS-217ENST00000440048 SSH3Q8TE77 659 aa29.31■■■□□ 2.28
VARS-217ENST00000440048 MVPQ14764 893 aaKnown RBP29.3■■■□□ 2.28
VARS-217ENST00000440048 COG6Q9Y2V7 657 aa29.3■■■□□ 2.28
VARS-217ENST00000440048 G3BP1Q13283 466 aaKnown RBP eCLIP29.29■■■□□ 2.287e-7■■■■□ 19.9
VARS-217ENST00000440048 DLGAP5Q15398 846 aa29.29■■■□□ 2.28
VARS-217ENST00000440048 MTMR14Q8NCE2 650 aa29.29■■■□□ 2.28
VARS-217ENST00000440048 TBC1D22AQ8WUA7 517 aa29.28■■■□□ 2.28
VARS-217ENST00000440048 SCAF8Q9UPN6 1271 aaKnown RBP29.28■■■□□ 2.28
VARS-217ENST00000440048 PCDHAC2Q9Y5I4 1007 aa29.28■■■□□ 2.28
VARS-217ENST00000440048 TLL2Q9Y6L7 1015 aa29.28■■■□□ 2.28
VARS-217ENST00000440048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.28■■■□□ 2.28
VARS-217ENST00000440048 ADORA1P30542 326 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 VEGFBP49765 207 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 TIMM10P62072 90 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 CFAP100Q494V2 611 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 DDX19BQ9UMR2 479 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 TTF2Q9UNY4 1162 aaKnown RBP29.27■■■□□ 2.28
VARS-217ENST00000440048 AKAP2Q9Y2D5 859 aa29.27■■■□□ 2.28
VARS-217ENST00000440048 GRIK5Q16478 980 aa29.26■■■□□ 2.27
VARS-217ENST00000440048 CEP85Q6P2H3 762 aa29.26■■■□□ 2.27
VARS-217ENST00000440048 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.26■■■□□ 2.27
VARS-217ENST00000440048 CDCA5Q96FF9 252 aa29.26■■■□□ 2.27
VARS-217ENST00000440048 ECM29Q5VYK3 1845 aa29.26■■■□□ 2.27
VARS-217ENST00000440048 A0A1B0GUL7 405 aa29.25■■■□□ 2.27
VARS-217ENST00000440048 HSPA1AP0DMV8 641 aaKnown RBP29.25■■■□□ 2.27
VARS-217ENST00000440048 HSPA1BP0DMV9 641 aaKnown RBP29.25■■■□□ 2.27
VARS-217ENST00000440048 PHKA1P46020 1223 aa29.25■■■□□ 2.27
VARS-217ENST00000440048 GNL3LQ9NVN8 582 aaKnown RBP29.25■■■□□ 2.27
VARS-217ENST00000440048 COL1A1P02452 1464 aaPredicted RBP29.24■■■□□ 2.27
VARS-217ENST00000440048 SPDYE2BA6NHP3 402 aa29.24■■■□□ 2.27
VARS-217ENST00000440048 SPDYE6P0CI01 402 aa29.24■■■□□ 2.27
VARS-217ENST00000440048 PDE3AQ14432 1141 aa29.24■■■□□ 2.27
VARS-217ENST00000440048 C20orf194Q5TEA3 1177 aa29.24■■■□□ 2.27
VARS-217ENST00000440048 SAPCD2Q86UD0 394 aa29.24■■■□□ 2.27
VARS-217ENST00000440048 SURF6O75683 361 aaKnown RBP29.23■■■□□ 2.27
VARS-217ENST00000440048 RBM5P52756 815 aaKnown RBP eCLIP29.23■■■□□ 2.27
VARS-217ENST00000440048 CCDC102BQ68D86 513 aa29.23■■■□□ 2.27
VARS-217ENST00000440048 XAGE2Q96GT9 111 aa29.23■■■□□ 2.27
VARS-217ENST00000440048 PRMT6Q96LA8 375 aaPredicted RBP29.23■■■□□ 2.27
VARS-217ENST00000440048 SERPINA10Q9UK55 444 aa29.23■■■□□ 2.27
VARS-217ENST00000440048 ECE1P42892 770 aa29.22■■■□□ 2.27
VARS-217ENST00000440048 APOBEC3FQ8IUX4 373 aaKnown RBP29.22■■■□□ 2.27
VARS-217ENST00000440048 WDR66Q8TBY9 1149 aa29.22■■■□□ 2.27
VARS-217ENST00000440048 ZBTB40Q9NUA8 1239 aa29.22■■■□□ 2.27
VARS-217ENST00000440048 NOP58Q9Y2X3 529 aaKnown RBP29.22■■■□□ 2.27
VARS-217ENST00000440048 AOX1Q06278 1338 aa29.21■■■□□ 2.27
VARS-217ENST00000440048 OS9Q13438 667 aaPredicted RBP29.21■■■□□ 2.27
VARS-217ENST00000440048 NEUROD6Q96NK8 337 aa29.21■■■□□ 2.27
VARS-217ENST00000440048 GBA2Q9HCG7 927 aaPredicted RBP29.21■■■□□ 2.27
VARS-217ENST00000440048 WDR33Q9C0J8 1336 aaKnown RBP29.2■■■□□ 2.27
VARS-217ENST00000440048 SEMA3EO15041 775 aa29.2■■■□□ 2.26
VARS-217ENST00000440048 CRKP46108 304 aa29.2■■■□□ 2.26
VARS-217ENST00000440048 PRAMEF18Q5VWM3 479 aa29.2■■■□□ 2.26
VARS-217ENST00000440048 SUGT1Q9Y2Z0 365 aa29.2■■■□□ 2.26
VARS-217ENST00000440048 ZBTB22O15209 634 aa29.19■■■□□ 2.26
VARS-217ENST00000440048 MYO1BO43795 1136 aa29.19■■■□□ 2.26
VARS-217ENST00000440048 IFFO2Q5TF58 517 aa29.19■■■□□ 2.26
VARS-217ENST00000440048 PAXIP1Q6ZW49 1069 aaPredicted RBP29.19■■■□□ 2.26
VARS-217ENST00000440048 C2orf69Q8N8R5 385 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms