RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MS4A1P11836 297 aa30.76■■■□□ 2.51
RAPGEF1-206ENST00000438647 SLC5A1P13866 664 aa30.76■■■□□ 2.51
RAPGEF1-206ENST00000438647 FBXO33Q7Z6M2 555 aa30.76■■■□□ 2.51
RAPGEF1-206ENST00000438647 LPIN2Q92539 896 aa30.76■■■□□ 2.51
RAPGEF1-206ENST00000438647 FGFR2P21802 821 aa30.75■■■□□ 2.51
RAPGEF1-206ENST00000438647 PA2G4Q9UQ80 394 aaKnown RBP30.75■■■□□ 2.51
RAPGEF1-206ENST00000438647 PITPNM2Q9BZ72 1349 aa30.74■■■□□ 2.51
RAPGEF1-206ENST00000438647 ANGEL2Q5VTE6 544 aaKnown RBP30.74■■■□□ 2.51
RAPGEF1-206ENST00000438647 CST9Q5W186 159 aa30.74■■■□□ 2.51
RAPGEF1-206ENST00000438647 CERS5Q8N5B7 392 aa30.74■■■□□ 2.51
RAPGEF1-206ENST00000438647 RASSF10A6NK89 507 aa30.73■■■□□ 2.51
RAPGEF1-206ENST00000438647 FRAT2O75474 233 aaPredicted RBP30.73■■■□□ 2.51
RAPGEF1-206ENST00000438647 RLBP1P12271 317 aa30.73■■■□□ 2.51
RAPGEF1-206ENST00000438647 RCAN3Q9UKA8 241 aa30.73■■■□□ 2.51
RAPGEF1-206ENST00000438647 DEFB115Q30KQ5 88 aa30.72■■■□□ 2.51
RAPGEF1-206ENST00000438647 ZNF408Q9H9D4 720 aa30.72■■■□□ 2.51
RAPGEF1-206ENST00000438647 JAG2Q9Y219 1238 aa30.72■■■□□ 2.51
RAPGEF1-206ENST00000438647 ASTN2O75129 1339 aaPredicted RBP30.72■■■□□ 2.51
RAPGEF1-206ENST00000438647 WNT10BO00744 389 aa30.71■■■□□ 2.51
RAPGEF1-206ENST00000438647 ATP2B3Q16720 1220 aa30.71■■■□□ 2.51
RAPGEF1-206ENST00000438647 MFSD14BQ5SR56 506 aa30.71■■■□□ 2.51
RAPGEF1-206ENST00000438647 ADM5C9JUS6 153 aa30.7■■■□□ 2.51
RAPGEF1-206ENST00000438647 NBPF9Q3BBW0 867 aa30.7■■■□□ 2.51
RAPGEF1-206ENST00000438647 TLL2Q9Y6L7 1015 aa30.7■■■□□ 2.51
RAPGEF1-206ENST00000438647 PCNTO95613 3336 aa30.7■■■□□ 2.5
RAPGEF1-206ENST00000438647 POLR2AP24928 1970 aaKnown RBP30.69■■■□□ 2.5
RAPGEF1-206ENST00000438647 BCAMP50895 628 aa30.69■■■□□ 2.5
RAPGEF1-206ENST00000438647 TBC1D22AQ8WUA7 517 aa30.69■■■□□ 2.5
RAPGEF1-206ENST00000438647 F8W031 263 aaPredicted RBP30.68■■■□□ 2.5
RAPGEF1-206ENST00000438647 ZBTB7BO15156 539 aaPredicted RBP30.68■■■□□ 2.5
RAPGEF1-206ENST00000438647 DLGAP5Q15398 846 aa30.68■■■□□ 2.5
RAPGEF1-206ENST00000438647 IQSEC3Q9UPP2 1182 aaPredicted RBP30.68■■■□□ 2.5
RAPGEF1-206ENST00000438647 MTMR14Q8NCE2 650 aa30.67■■■□□ 2.5
RAPGEF1-206ENST00000438647 PNMA6EA0A0J9YXQ4 647 aa30.66■■■□□ 2.5
RAPGEF1-206ENST00000438647 CHAF1AQ13111 956 aaPredicted RBP30.66■■■□□ 2.5
RAPGEF1-206ENST00000438647 SAPCD2Q86UD0 394 aa30.66■■■□□ 2.5
RAPGEF1-206ENST00000438647 PANK1Q8TE04 598 aa30.66■■■□□ 2.5
RAPGEF1-206ENST00000438647 VEGFBP49765 207 aa30.65■■■□□ 2.5
RAPGEF1-206ENST00000438647 ZBED3Q96IU2 234 aaPredicted RBP30.65■■■□□ 2.5
RAPGEF1-206ENST00000438647 GNL3LQ9NVN8 582 aaKnown RBP30.65■■■□□ 2.5
RAPGEF1-206ENST00000438647 AKAP2Q9Y2D5 859 aa30.65■■■□□ 2.5
RAPGEF1-206ENST00000438647 ECE1P42892 770 aa30.64■■■□□ 2.5
RAPGEF1-206ENST00000438647 APOBEC3FQ8IUX4 373 aaKnown RBP30.64■■■□□ 2.5
RAPGEF1-206ENST00000438647 HHIPL1Q96JK4 782 aa30.64■■■□□ 2.5
RAPGEF1-206ENST00000438647 TTF2Q9UNY4 1162 aaKnown RBP30.64■■■□□ 2.5
RAPGEF1-206ENST00000438647 MYO1BO43795 1136 aa30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 G3BP1Q13283 466 aaKnown RBP eCLIP30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 CFAP100Q494V2 611 aa30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 DLK2Q6UY11 383 aa30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 PAXIP1Q6ZW49 1069 aaPredicted RBP30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 C2orf69Q8N8R5 385 aa30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 CDCA5Q96FF9 252 aa30.63■■■□□ 2.49
RAPGEF1-206ENST00000438647 ATP8B2P98198 1209 aa30.62■■■□□ 2.49
RAPGEF1-206ENST00000438647 C1orf115Q9H7X2 142 aa30.62■■■□□ 2.49
RAPGEF1-206ENST00000438647 GBA2Q9HCG7 927 aaPredicted RBP30.62■■■□□ 2.49
RAPGEF1-206ENST00000438647 SERPINA10Q9UK55 444 aa30.62■■■□□ 2.49
RAPGEF1-206ENST00000438647 ARAP2Q8WZ64 1704 aa30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 RBM5P52756 815 aaKnown RBP eCLIP30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 POLA2Q14181 598 aa30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 SSH3Q8TE77 659 aa30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 SUGT1Q9Y2Z0 365 aa30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 WDR33Q9C0J8 1336 aaKnown RBP30.61■■■□□ 2.49
RAPGEF1-206ENST00000438647 SPDYE2BA6NHP3 402 aa30.6■■■□□ 2.49
RAPGEF1-206ENST00000438647 SPDYE6P0CI01 402 aa30.6■■■□□ 2.49
RAPGEF1-206ENST00000438647 TFCP2Q12800 502 aa30.6■■■□□ 2.49
RAPGEF1-206ENST00000438647 WDR66Q8TBY9 1149 aa30.6■■■□□ 2.49
RAPGEF1-206ENST00000438647 MVPQ14764 893 aaKnown RBP30.59■■■□□ 2.49
RAPGEF1-206ENST00000438647 CAPNS2Q96L46 248 aa30.59■■■□□ 2.49
RAPGEF1-206ENST00000438647 DDX19BQ9UMR2 479 aa30.59■■■□□ 2.49
RAPGEF1-206ENST00000438647 SEMA3EO15041 775 aa30.58■■■□□ 2.49
RAPGEF1-206ENST00000438647 HUNKP57058 714 aa30.58■■■□□ 2.49
RAPGEF1-206ENST00000438647 CHMP4BQ9H444 224 aaKnown RBP30.58■■■□□ 2.49
RAPGEF1-206ENST00000438647 MAST3O60307 1309 aa30.57■■■□□ 2.48
RAPGEF1-206ENST00000438647 A0A1B0GUL7 405 aa30.57■■■□□ 2.48
RAPGEF1-206ENST00000438647 HDLBPQ00341 1268 aaKnown RBP30.57■■■□□ 2.48
RAPGEF1-206ENST00000438647 CYP4F22Q6NT55 531 aa30.57■■■□□ 2.48
RAPGEF1-206ENST00000438647 PRMT6Q96LA8 375 aaPredicted RBP30.57■■■□□ 2.48
RAPGEF1-206ENST00000438647 ZBTB22O15209 634 aa30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 NF2P35240 595 aa30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 TIMM10P62072 90 aa30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 FKBP1BP68106 108 aa30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 DENND2AQ9ULE3 1009 aa30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 SCAF8Q9UPN6 1271 aaKnown RBP30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 COL1A1P02452 1464 aaPredicted RBP30.56■■■□□ 2.48
RAPGEF1-206ENST00000438647 ADORA1P30542 326 aa30.55■■■□□ 2.48
RAPGEF1-206ENST00000438647 PHKA1P46020 1223 aa30.55■■■□□ 2.48
RAPGEF1-206ENST00000438647 CRKP46108 304 aa30.55■■■□□ 2.48
RAPGEF1-206ENST00000438647 OS9Q13438 667 aaPredicted RBP30.55■■■□□ 2.48
RAPGEF1-206ENST00000438647 CCDC102BQ68D86 513 aa30.55■■■□□ 2.48
RAPGEF1-206ENST00000438647 MYH13Q9UKX3 1938 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 HSPA1AP0DMV8 641 aaKnown RBP30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 HSPA1BP0DMV9 641 aaKnown RBP30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 GRM1Q13255 1194 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 CEP85Q6P2H3 762 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 XAGE2Q96GT9 111 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 COG6Q9Y2V7 657 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 PCDHAC2Q9Y5I4 1007 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 PPP2R3BQ9Y5P8 575 aa30.54■■■□□ 2.48
RAPGEF1-206ENST00000438647 ECM29Q5VYK3 1845 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms