RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NPDC1Q9NQX5 325 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 ZHX1Q9UKY1 873 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-202ENST00000432306 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
VTI1A-202ENST00000432306 SMTNL1A8MU46 457 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 STX6O43752 255 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 ATG7O95352 703 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 GCP02774 474 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 GNAI3P08754 354 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 ATP8B2P98198 1209 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 TXNRD1Q16881 649 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.5□□□□□ -0.89
VTI1A-202ENST00000432306 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 PAXBP1Q9Y5B6 917 aa9.5□□□□□ -0.89
VTI1A-202ENST00000432306 AP5Z1O43299 807 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 MAP3K7O43318 606 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 CAVIN2O95810 425 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 LIG1P18858 919 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 SYT1P21579 422 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 PAX3P23760 479 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 CBX1P83916 185 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 NCBP1Q09161 790 aaKnown RBP9.49□□□□□ -0.89
VTI1A-202ENST00000432306 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 GPR162Q16538 588 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 ZNF830Q96NB3 372 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-202ENST00000432306 TM6SF1Q9BZW5 370 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 KCND1Q9NSA2 647 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 CTNNA3Q9UI47 895 aa9.49□□□□□ -0.89
VTI1A-202ENST00000432306 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-202ENST00000432306 USP42Q9H9J4 1324 aaKnown RBP9.49□□□□□ -0.89
VTI1A-202ENST00000432306 EXOC5O00471 708 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 SGSM2O43147 1006 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 CCDC192P0DO97 292 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 ABL2P42684 1182 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 CCAR1Q8IX12 1150 aaKnown RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 SECISBP2LQ93073 1101 aaKnown RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 ANO2Q9NQ90 1003 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 CGNQ9P2M7 1197 aaKnown RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 LIMCH1Q9UPQ0 1083 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 COL18A1P39060 1754 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 CDC25BP30305 580 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 KRT24Q2M2I5 525 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 SLFNL1Q499Z3 407 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 ZCRB1Q8TBF4 217 aaKnown RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 TANGO6Q9C0B7 1094 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-202ENST00000432306 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 CNPY2Q9Y2B0 182 aa9.48□□□□□ -0.89
VTI1A-202ENST00000432306 RGPD5Q99666 1765 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 NHSQ6T4R5 1651 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 NUDT7P0C024 238 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 TSHZ1Q6ZSZ6 1077 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 PTF1AQ7RTS3 328 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 PLA2G4DQ86XP0 818 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-202ENST00000432306 RTF1Q92541 710 aaKnown RBP9.47□□□□□ -0.89
VTI1A-202ENST00000432306 TSC1Q92574 1164 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 LSG1Q9H089 658 aaKnown RBP9.47□□□□□ -0.89
VTI1A-202ENST00000432306 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 SNX14Q9Y5W7 946 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 KDRP35968 1356 aa9.47□□□□□ -0.89
VTI1A-202ENST00000432306 SLC20A2Q08357 652 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 VPS53Q5VIR6 699 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 RUFY3Q7L099 469 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 TDRD7Q8NHU6 1098 aaKnown RBP9.46□□□□□ -0.89
VTI1A-202ENST00000432306 SSH3Q8TE77 659 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 COG3Q96JB2 828 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 BABAM1Q9NWV8 329 aa9.46□□□□□ -0.89
VTI1A-202ENST00000432306 WDR17Q8IZU2 1322 aa9.46□□□□□ -0.9
VTI1A-202ENST00000432306 USP31Q70CQ4 1352 aa9.46□□□□□ -0.9
VTI1A-202ENST00000432306 UTRNP46939 3433 aa9.46□□□□□ -0.9
VTI1A-202ENST00000432306 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.9
VTI1A-202ENST00000432306 SLIT3O75094 1523 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 NEMFO60524 1076 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 RFC5P40937 340 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 SARM1Q6SZW1 724 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 PI4K2BQ8TCG2 481 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 UPF3BQ9BZI7 483 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms