RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CAVIN4Q5BKX8 364 aa21.97■■□□□ 1.11
NUP50-208ENST00000430547 BEGAINQ9BUH8 593 aa21.97■■□□□ 1.11
NUP50-208ENST00000430547 JAG2Q9Y219 1238 aa21.97■■□□□ 1.11
NUP50-208ENST00000430547 F8W031 263 aaPredicted RBP21.96■■□□□ 1.11
NUP50-208ENST00000430547 CERS5Q8N5B7 392 aa21.96■■□□□ 1.11
NUP50-208ENST00000430547 LRRFIP2Q9Y608 721 aaKnown RBP21.96■■□□□ 1.11
NUP50-208ENST00000430547 EYA2O00167 538 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 FOXN1O15353 648 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 FRAT2O75474 233 aaPredicted RBP21.95■■□□□ 1.1
NUP50-208ENST00000430547 BCAR3O75815 825 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 GNAI3P08754 354 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 DLGAP5Q15398 846 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
NUP50-208ENST00000430547 TDRD7Q8NHU6 1098 aaKnown RBP21.95■■□□□ 1.1
NUP50-208ENST00000430547 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
NUP50-208ENST00000430547 MEIS3Q99687 375 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 WBP1LQ9NX94 342 aa21.95■■□□□ 1.1
NUP50-208ENST00000430547 PAPPA2Q9BXP8 1791 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 IFIT1P09914 478 aaKnown RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 TRIM27P14373 513 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 MAP2K2P36507 400 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 RFX5P48382 616 aaPredicted RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 CTCFP49711 727 aaPredicted RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 PUM3Q15397 648 aaKnown RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 COL13A1Q5TAT6 717 aaPredicted RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 ATF7IPQ6VMQ6 1270 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 APOBEC3FQ8IUX4 373 aaKnown RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 VGLL2Q8N8G2 317 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 SCAF8Q9UPN6 1271 aaKnown RBP21.94■■□□□ 1.1
NUP50-208ENST00000430547 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 FAM205AQ6ZU69 1335 aa21.94■■□□□ 1.1
NUP50-208ENST00000430547 MYO1BO43795 1136 aa21.93■■□□□ 1.1
NUP50-208ENST00000430547 AOC2O75106 756 aa21.93■■□□□ 1.1
NUP50-208ENST00000430547 PTPN12Q05209 780 aaKnown RBP21.93■■□□□ 1.1
NUP50-208ENST00000430547 MFSD14BQ5SR56 506 aa21.93■■□□□ 1.1
NUP50-208ENST00000430547 SIL1Q9H173 461 aa21.93■■□□□ 1.1
NUP50-208ENST00000430547 NF2P35240 595 aa21.92■■□□□ 1.1
NUP50-208ENST00000430547 RBM5P52756 815 aaKnown RBP eCLIP21.92■■□□□ 1.1
NUP50-208ENST00000430547 IFFO2Q5TF58 517 aa21.92■■□□□ 1.1
NUP50-208ENST00000430547 RGMBQ6NW40 437 aa21.92■■□□□ 1.1
NUP50-208ENST00000430547 FBXO3Q9UK99 471 aa21.92■■□□□ 1.1
NUP50-208ENST00000430547 SLC5A1P13866 664 aa21.91■■□□□ 1.1
NUP50-208ENST00000430547 FKBP1BP68106 108 aa21.91■■□□□ 1.1
NUP50-208ENST00000430547 NOGQ13253 232 aa21.91■■□□□ 1.1
NUP50-208ENST00000430547 ZKSCAN2Q63HK3 967 aa21.91■■□□□ 1.1
NUP50-208ENST00000430547 CLUAP1Q96AJ1 413 aa21.91■■□□□ 1.1
NUP50-208ENST00000430547 IQSEC3Q9UPP2 1182 aaPredicted RBP21.91■■□□□ 1.1
NUP50-208ENST00000430547 ZNF157P51786 506 aaPredicted RBP21.9■■□□□ 1.1
NUP50-208ENST00000430547 CHAF1AQ13111 956 aaPredicted RBP21.9■■□□□ 1.1
NUP50-208ENST00000430547 CFAP100Q494V2 611 aa21.9■■□□□ 1.1
NUP50-208ENST00000430547 FBXO33Q7Z6M2 555 aa21.9■■□□□ 1.1
NUP50-208ENST00000430547 MTMR14Q8NCE2 650 aa21.9■■□□□ 1.1
NUP50-208ENST00000430547 CCDC102AQ96A19 550 aa21.9■■□□□ 1.1
NUP50-208ENST00000430547 COL1A1P02452 1464 aaPredicted RBP21.9■■□□□ 1.1
NUP50-208ENST00000430547 CIAO1O76071 339 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 TTLL12Q14166 644 aaPredicted RBP21.89■■□□□ 1.09
NUP50-208ENST00000430547 PRAMEF18Q5VWM3 479 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 TNS4Q8IZW8 715 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 TBC1D22AQ8WUA7 517 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 LPIN2Q92539 896 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 ZBED3Q96IU2 234 aaPredicted RBP21.89■■□□□ 1.09
NUP50-208ENST00000430547 CEP126Q9P2H0 1117 aa21.89■■□□□ 1.09
NUP50-208ENST00000430547 TTF2Q9UNY4 1162 aaKnown RBP21.89■■□□□ 1.09
NUP50-208ENST00000430547 BCAMP50895 628 aa21.88■■□□□ 1.09
NUP50-208ENST00000430547 ATG9AQ7Z3C6 839 aa21.88■■□□□ 1.09
NUP50-208ENST00000430547 AKAP11Q9UKA4 1901 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 SPDYE2BA6NHP3 402 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 SRGAP3O43295 1099 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 SPDYE6P0CI01 402 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 FGFR2P21802 821 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 IL15P40933 162 aaPredicted RBP21.87■■□□□ 1.09
NUP50-208ENST00000430547 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
NUP50-208ENST00000430547 PRDM10Q9NQV6 1147 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
NUP50-208ENST00000430547 GNAI2P04899 355 aa21.86■■□□□ 1.09
NUP50-208ENST00000430547 LBX1P52954 281 aa21.86■■□□□ 1.09
NUP50-208ENST00000430547 VEZTQ9HBM0 779 aa21.86■■□□□ 1.09
NUP50-208ENST00000430547 COPRSQ9NQ92 184 aa21.86■■□□□ 1.09
NUP50-208ENST00000430547 SERPINA10Q9UK55 444 aa21.86■■□□□ 1.09
NUP50-208ENST00000430547 PA2G4Q9UQ80 394 aaKnown RBP21.86■■□□□ 1.09
NUP50-208ENST00000430547 CLRN2A0PK11 232 aa21.85■■□□□ 1.09
NUP50-208ENST00000430547 CA12O43570 354 aa21.85■■□□□ 1.09
NUP50-208ENST00000430547 PRMT6Q96LA8 375 aaPredicted RBP21.85■■□□□ 1.09
NUP50-208ENST00000430547 PCDHAC2Q9Y5I4 1007 aa21.85■■□□□ 1.09
NUP50-208ENST00000430547 HSPA8P11142 646 aaKnown RBP21.84■■□□□ 1.09
NUP50-208ENST00000430547 TMEM57Q8N5G2 664 aa21.84■■□□□ 1.09
NUP50-208ENST00000430547 DEFB129Q9H1M3 183 aa21.84■■□□□ 1.09
NUP50-208ENST00000430547 PPP2R3BQ9Y5P8 575 aa21.84■■□□□ 1.09
NUP50-208ENST00000430547 FAM155AB1AL88 458 aaPredicted RBP21.83■■□□□ 1.09
NUP50-208ENST00000430547 SLC10A3P09131 477 aa21.83■■□□□ 1.09
NUP50-208ENST00000430547 MTX1Q13505 466 aa21.83■■□□□ 1.09
NUP50-208ENST00000430547 ARMC9Q7Z3E5 817 aa21.83■■□□□ 1.09
NUP50-208ENST00000430547 GNL3LQ9NVN8 582 aaKnown RBP21.83■■□□□ 1.09
NUP50-208ENST00000430547 MAST3O60307 1309 aa21.82■■□□□ 1.08
NUP50-208ENST00000430547 UBE2Q2LH0YL09 131 aa21.82■■□□□ 1.08
NUP50-208ENST00000430547 CRKP46108 304 aa21.82■■□□□ 1.08
NUP50-208ENST00000430547 TNFAIP1Q13829 316 aa21.82■■□□□ 1.08
NUP50-208ENST00000430547 MOB2Q70IA6 237 aa21.82■■□□□ 1.08
NUP50-208ENST00000430547 PRKG1Q13976 671 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms