RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 NRKQ7Z2Y5 1582 aa25.72■■□□□ 1.71
CUEDC1-202ENST00000407144 MRPS27Q92552 414 aaKnown RBP25.72■■□□□ 1.71
CUEDC1-202ENST00000407144 A0A1W2PQ27 194 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 A0A1W2PQ64 194 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 A0A1W2PQD8 194 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 JAK2O60674 1132 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 CUTAO60888 179 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 BICC1Q9H694 974 aaKnown RBP25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 TDO2P48775 406 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 PPP1R42Q7Z4L9 355 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 VSTM4Q8IW00 320 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 STAG1Q8WVM7 1258 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 EVI5LQ96CN4 794 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 HMG20BQ9P0W2 317 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 STK26Q9P289 416 aa25.71■■□□□ 1.71
CUEDC1-202ENST00000407144 ABCC6O95255 1503 aa25.7■■□□□ 1.7
CUEDC1-202ENST00000407144 EDC4Q6P2E9 1401 aaKnown RBP25.7■■□□□ 1.7
CUEDC1-202ENST00000407144 LLPHQ9BRT6 129 aaKnown RBP25.7■■□□□ 1.7
CUEDC1-202ENST00000407144 NPHP4O75161 1426 aaPredicted RBP25.7■■□□□ 1.7
CUEDC1-202ENST00000407144 HNRNPH1P31943 449 aaKnown RBP25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 MNAT1P51948 309 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 CEBPZQ03701 1054 aaKnown RBP25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 CASP8Q14790 479 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 SMARCC2Q8TAQ2 1214 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 ABCB6Q9NP58 842 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 STX10O60499 249 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 USP28Q96RU2 1077 aa25.69■■□□□ 1.7
CUEDC1-202ENST00000407144 ANKRD65E5RJM6 399 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 UBASH3AP57075 661 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 ADALQ6DHV7 355 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 FAM177A1Q8N128 213 aaPredicted RBP25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 FAM204AQ9H8W3 233 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 VIPAS39Q9H9C1 493 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 STK3Q13188 491 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 KAT2BQ92831 832 aa25.68■■□□□ 1.7
CUEDC1-202ENST00000407144 FAM208AQ9UK61 1670 aaKnown RBP25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 CCDC189A1A4V9 331 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 C21orf2O43822 256 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 TXNDC2Q86VQ3 553 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 ANKLE2Q86XL3 938 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 CCDC102AQ96A19 550 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 CACNA1FO60840 1977 aa25.67■■□□□ 1.7
CUEDC1-202ENST00000407144 TOP1P11387 765 aaKnown RBP25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 ME1P48163 572 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 AARSP49588 968 aaKnown RBP eCLIP25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 AFAP1L1Q8TED9 768 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 COL9A3Q14050 684 aaPredicted RBP25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 CTCFLQ8NI51 663 aaPredicted RBP25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 ERCC4Q92889 916 aaPredicted RBP25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 FBXW7Q969H0 707 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 PNKPQ96T60 521 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 HSD3B7Q9H2F3 369 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 ECHDC1Q9NTX5 307 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 TSPYL4Q9UJ04 414 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 CDC23Q9UJX2 597 aa25.66■■□□□ 1.7
CUEDC1-202ENST00000407144 POTEDQ86YR6 584 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 GPATCH3Q96I76 525 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 BAG1Q99933 345 aaPredicted RBP25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 NEDD4P46934 1319 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 EXOC5O00471 708 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 LMOD1P29536 600 aaPredicted RBP25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 KRT32Q14532 448 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 CCDC12Q8WUD4 166 aaPredicted RBP25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 JCADQ9P266 1359 aa25.65■■□□□ 1.7
CUEDC1-202ENST00000407144 SHOX2O60902 331 aaPredicted RBP25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 WDHD1O75717 1129 aaPredicted RBP25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 SLC3A2P08195 630 aaKnown RBP25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 TBX2Q13207 712 aaPredicted RBP25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 KCNV1Q6PIU1 500 aa25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 TCEANC2Q96MN5 208 aa25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 PCDHA7Q9UN72 937 aa25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 SULT6B1Q6IMI4 303 aa25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 CNPY4Q8N129 248 aa25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 FTOQ9C0B1 505 aaKnown RBP eCLIP25.63■■□□□ 1.69
CUEDC1-202ENST00000407144 DLC1Q96QB1 1528 aa25.62■■□□□ 1.69
CUEDC1-202ENST00000407144 SERPINC1P01008 464 aa25.62■■□□□ 1.69
CUEDC1-202ENST00000407144 DHX37Q8IY37 1157 aaKnown RBP25.62■■□□□ 1.69
CUEDC1-202ENST00000407144 FMNL2Q96PY5 1086 aa25.62■■□□□ 1.69
CUEDC1-202ENST00000407144 PRPF6O94906 941 aaKnown RBP25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 ATP1A3P13637 1013 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 SETQ01105 290 aaPredicted RBP25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 DDR1Q08345 913 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 DPF2Q92785 391 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 RTEL1Q9NZ71 1219 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 RNF40O75150 1001 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 NDUFA8P51970 172 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 CFAP100Q494V2 611 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 TTLL5Q6EMB2 1281 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 CLASRPQ8N2M8 674 aaKnown RBP25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 EID1Q9Y6B2 187 aa25.61■■□□□ 1.69
CUEDC1-202ENST00000407144 NUTM2FA1L443 756 aa25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 MYL5Q02045 173 aa25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 NMIQ13287 307 aaPredicted RBP25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 PLEKHO1Q53GL0 409 aaPredicted RBP25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 NUTM2GQ5VZR2 741 aa25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 EGFL6Q8IUX8 553 aa25.6■■□□□ 1.69
CUEDC1-202ENST00000407144 PPP1R12AO14974 1030 aaPredicted RBP25.59■■□□□ 1.69
CUEDC1-202ENST00000407144 HSP90AB3PQ58FF7 597 aa25.59■■□□□ 1.69
CUEDC1-202ENST00000407144 SUGCTQ9HAC7 445 aa25.59■■□□□ 1.69
CUEDC1-202ENST00000407144 EBAG9O00559 213 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms