RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 LOC102724428A0A0B4J2F2 783 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CYP27B1O15528 508 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 GPAA1O43292 621 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 MBD4O95243 580 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 SIK1P57059 783 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CAMK4Q16566 473 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 SPC24Q8NBT2 197 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 NOC3LQ8WTT2 800 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 LRRC2Q9BYS8 371 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 EHMT1Q9H9B1 1298 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CNPY2Q9Y2B0 182 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 PARP3Q9Y6F1 533 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 ARHGAP23Q9P227 1491 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 OFD1O75665 1012 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 KIF20AO95235 890 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CCDC96Q2M329 555 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 SAMD1Q6SPF0 538 aaPredicted RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 LRRC27Q9C0I9 530 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 ZMYND15Q9H091 742 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CABP5Q9NP86 173 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 R3HCC1Q9Y3T6 440 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 ARHGEF28Q8N1W1 1705 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 ATP10DQ9P241 1426 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 H7C1W4 665 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 FGFR1OPO95684 399 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 TSPY3P0CV98 308 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 TSPY8P0CW00 308 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 GSDMDP57764 484 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 CCAR2Q8N163 923 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 SPATA5Q8NB90 893 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 ZNF622Q969S3 477 aaKnown RBP eCLIP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 GTPBP4Q9BZE4 634 aaKnown RBP5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 AXIN2Q9Y2T1 843 aa5.47□□□□□ -1.53
PCDH11X-207ENST00000406881 DCCP43146 1447 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ZNF76P36508 570 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ZNF165P49910 485 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 AMPD3Q01432 767 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 DNM1Q05193 864 aaKnown RBP5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 CCDC82Q8N4S0 544 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 FLAD1Q8NFF5 587 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 CUL5Q93034 780 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ZSWIM6Q9HCJ5 1215 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 TCP11L1Q9NUJ3 509 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ASAP1Q9ULH1 1129 aa5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ANGEL1Q9UNK9 670 aaKnown RBP5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 NSFL1CQ9UNZ2 370 aaKnown RBP5.46□□□□□ -1.53
PCDH11X-207ENST00000406881 ZAP70P43403 619 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 RPS8P62241 208 aaKnown RBP5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 TNIP1Q15025 636 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 TTC6Q86TZ1 520 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 FAM200AQ8TCP9 573 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 MAP4K1Q92918 833 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 TFCP2L1Q9NZI6 479 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 IQSEC3Q9UPP2 1182 aaPredicted RBP5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 MAST3O60307 1309 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 SEMA3EO15041 775 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 SPTLC2O15270 562 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 BRD1O95696 1058 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 SYKP43405 635 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 CFAP100Q494V2 611 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 CKAP2LQ8IYA6 745 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 LSG1Q9H089 658 aaKnown RBP5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 RGS12O14924 1447 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 PXDNLA1KZ92 1463 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 ITSN1Q15811 1721 aa5.46□□□□□ -1.54
PCDH11X-207ENST00000406881 TRIM75PA6NK02 468 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PDE8BO95263 885 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 SFPQP23246 707 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 UBE4AQ14139 1066 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 HS1BP3Q53T59 392 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 CCDC129Q6ZRS4 1044 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 CCDC144CPQ8IYA2 1237 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 TBC1D22AQ8WUA7 517 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PIBF1Q8WXW3 757 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 ZNF274Q96GC6 653 aaPredicted RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 ACBD3Q9H3P7 528 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 RMND1Q9NWS8 449 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 MCM9Q9NXL9 1143 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 TRPC5Q9UL62 973 aaPredicted RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PATL2C9JE40 543 aaKnown RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 COL3A1P02461 1466 aaPredicted RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 UBA7P41226 1012 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 FILIP1Q7Z7B0 1213 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PIGBQ92521 554 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 CALML4Q96GE6 196 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 CD163L1Q9NR16 1453 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 DBNLQ9UJU6 430 aaKnown RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 GGA1Q9UJY5 639 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 STX8Q9UNK0 236 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 ZBTB1Q9Y2K1 713 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 RFX7Q2KHR2 1363 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 ZNF532Q9HCE3 1301 aa5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PCP11498 1178 aaKnown RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 CRKLP46109 303 aaKnown RBP5.45□□□□□ -1.54
PCDH11X-207ENST00000406881 PTPN12Q05209 780 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms