RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 IRAK1P51617 712 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 NLRP12P59046 1061 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 EHHADHQ08426 723 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 C19orf57Q0VDD7 668 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 SLC7A3Q8WY07 619 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 SOX13Q9UN79 622 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 MTMR7Q9Y216 660 aa7.4□□□□□ -1.22
SNAPC3-201ENST00000380799 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 GAS2O43903 313 aaKnown RBP7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 BEND4Q6ZU67 534 aa7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 GTF3C2Q8WUA4 911 aaPredicted RBP7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 BSNDQ8WZ55 320 aa7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 GZF1Q9H116 711 aaPredicted RBP7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
SNAPC3-201ENST00000380799 PHACTR2O75167 634 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 MPSTP25325 297 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 PREPP48147 710 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 AAMPQ13685 434 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 SNX29Q8TEQ0 813 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 OSMRQ99650 979 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
SNAPC3-201ENST00000380799 FAM13AO94988 1023 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 MED26O95402 600 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 ACPPP15309 386 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 SPINK2P20155 84 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 GP2P55259 537 aaKnown RBP7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 IKBKEQ14164 716 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 NXPE3Q969Y0 559 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 CHRDQ9H2X0 955 aa7.37□□□□□ -1.23
SNAPC3-201ENST00000380799 TNFRSF21O75509 655 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 TXKP42681 527 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 TMCO4Q5TGY1 634 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 SHKBP1Q8TBC3 707 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 SOX17Q9H6I2 414 aaPredicted RBP7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 GOLGA2P5Q9HBQ8 144 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 CYP4F12Q9HCS2 524 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 POLIQ9UNA4 740 aa7.36□□□□□ -1.23
SNAPC3-201ENST00000380799 A6NHS1 94 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 PRR19A6NJB7 356 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 NPR3P17342 541 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 SSFA2P28290 1259 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 DTX1Q86Y01 620 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 KRTAP1-3Q8IUG1 177 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 HHIPQ96QV1 700 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 ZKSCAN3Q9BRR0 538 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 BHLHE41Q9C0J9 482 aaPredicted RBP7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 USTQ9Y2C2 406 aa7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.35□□□□□ -1.23
SNAPC3-201ENST00000380799 TRPA1O75762 1119 aa7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 WNT11O96014 354 aa7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 MAP4P27816 1152 aaKnown RBP7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 SF3B2Q13435 895 aaKnown RBP7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 CPSF6Q16630 551 aaKnown RBP eCLIP7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 C12orf50Q8NA57 414 aaPredicted RBP7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 SMG8Q8ND04 991 aaKnown RBP7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 SUGCTQ9HAC7 445 aa7.34□□□□□ -1.23
SNAPC3-201ENST00000380799 CARNS1A5YM72 827 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 SOX1O00570 391 aaPredicted RBP7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 EREGO14944 169 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 TMPRSS13Q9BYE2 586 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 ATG3Q9NT62 314 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 AMOTL2Q9Y2J4 779 aa7.33□□□□□ -1.24
SNAPC3-201ENST00000380799 WDR64B1ANS9 1081 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 BRD1O95696 1058 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 RXRBP28702 533 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 MFAP1P55081 439 aaKnown RBP7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 RGS22Q8NE09 1264 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 ASAP3Q8TDY4 903 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 PIM2Q9P1W9 311 aa7.32□□□□□ -1.24
SNAPC3-201ENST00000380799 LOC100289279A0A1B0GTE1 492 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 TMEM88BA6NKF7 163 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 TIAF1O95411 115 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 USP11P51784 963 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 FKBP4Q02790 459 aaKnown RBP eCLIP7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 KCNA1Q09470 495 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 MTMR3Q13615 1198 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 EXOSC6Q5RKV6 272 aaKnown RBP7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 HP1BP3Q5SSJ5 553 aaPredicted RBP7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 PAOXQ6QHF9 649 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 MFSD14AQ96MC6 490 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 FMNL2Q96PY5 1086 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 YIPF2Q9BWQ6 316 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 LEMD3Q9Y2U8 911 aa7.31□□□□□ -1.24
SNAPC3-201ENST00000380799 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 TAL1P17542 331 aaPredicted RBP7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 SGO2Q562F6 1265 aa7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 HGSNATQ68CP4 663 aa7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 METTL22Q9BUU2 404 aaPredicted RBP7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 OSBPL1AQ9BXW6 950 aa7.3□□□□□ -1.24
SNAPC3-201ENST00000380799 FAM95CA0A1B0GW59 222 aa7.29□□□□□ -1.24
SNAPC3-201ENST00000380799 BTBD11A6QL63 1104 aa7.29□□□□□ -1.24
SNAPC3-201ENST00000380799 GSTM4Q03013 218 aa7.29□□□□□ -1.24
SNAPC3-201ENST00000380799 GJD3Q8N144 294 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms