RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 USP48Q86UV5 1035 aa24.9■■□□□ 1.58
TMEM53-205ENST00000372244 DCPSQ96C86 337 aaKnown RBP24.9■■□□□ 1.58
TMEM53-205ENST00000372244 ASTN2O75129 1339 aaPredicted RBP24.9■■□□□ 1.58
TMEM53-205ENST00000372244 ATP8B2P98198 1209 aa24.89■■□□□ 1.58
TMEM53-205ENST00000372244 KRT26Q7Z3Y9 468 aa24.89■■□□□ 1.58
TMEM53-205ENST00000372244 VPS37DQ86XT2 251 aa24.89■■□□□ 1.58
TMEM53-205ENST00000372244 PCNTO95613 3336 aa24.89■■□□□ 1.57
TMEM53-205ENST00000372244 JMYQ8N9B5 988 aa24.89■■□□□ 1.57
TMEM53-205ENST00000372244 ZBED3Q96IU2 234 aaPredicted RBP24.89■■□□□ 1.57
TMEM53-205ENST00000372244 WNT10BO00744 389 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 SLC5A1P13866 664 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 POLA2Q14181 598 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 NBPF9Q3BBW0 867 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 HDAC9Q9UKV0 1011 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 JAG2Q9Y219 1238 aa24.88■■□□□ 1.57
TMEM53-205ENST00000372244 DLK2Q6UY11 383 aa24.87■■□□□ 1.57
TMEM53-205ENST00000372244 SSH3Q8TE77 659 aa24.87■■□□□ 1.57
TMEM53-205ENST00000372244 GGA3Q9NZ52 723 aa24.87■■□□□ 1.57
TMEM53-205ENST00000372244 ATP2B3Q16720 1220 aa24.86■■□□□ 1.57
TMEM53-205ENST00000372244 MFSD14BQ5SR56 506 aa24.86■■□□□ 1.57
TMEM53-205ENST00000372244 ANGEL2Q5VTE6 544 aaKnown RBP24.86■■□□□ 1.57
TMEM53-205ENST00000372244 MTMR14Q8NCE2 650 aa24.86■■□□□ 1.57
TMEM53-205ENST00000372244 POLR2AP24928 1970 aaKnown RBP24.85■■□□□ 1.57
TMEM53-205ENST00000372244 PITPNM2Q9BZ72 1349 aa24.85■■□□□ 1.57
TMEM53-205ENST00000372244 CELF2O95319 508 aaKnown RBP24.85■■□□□ 1.57
TMEM53-205ENST00000372244 IQSEC3Q9UPP2 1182 aaPredicted RBP24.85■■□□□ 1.57
TMEM53-205ENST00000372244 RASSF10A6NK89 507 aa24.84■■□□□ 1.57
TMEM53-205ENST00000372244 SULF1Q8IWU6 871 aa24.84■■□□□ 1.57
TMEM53-205ENST00000372244 C1orf115Q9H7X2 142 aa24.84■■□□□ 1.57
TMEM53-205ENST00000372244 CNTNAP1P78357 1384 aa24.84■■□□□ 1.57
TMEM53-205ENST00000372244 ADM5C9JUS6 153 aa24.83■■□□□ 1.57
TMEM53-205ENST00000372244 ZBTB22O15209 634 aa24.83■■□□□ 1.57
TMEM53-205ENST00000372244 TFCP2Q12800 502 aa24.83■■□□□ 1.57
TMEM53-205ENST00000372244 MVPQ14764 893 aaKnown RBP24.83■■□□□ 1.57
TMEM53-205ENST00000372244 MKRN1Q9UHC7 482 aaKnown RBP24.83■■□□□ 1.57
TMEM53-205ENST00000372244 TIMM10P62072 90 aa24.83■■□□□ 1.56
TMEM53-205ENST00000372244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.83■■□□□ 1.56
TMEM53-205ENST00000372244 F8W031 263 aaPredicted RBP24.82■■□□□ 1.56
TMEM53-205ENST00000372244 FRAT2O75474 233 aaPredicted RBP24.82■■□□□ 1.56
TMEM53-205ENST00000372244 G3BP1Q13283 466 aaKnown RBP eCLIP24.82■■□□□ 1.56
TMEM53-205ENST00000372244 DEFB115Q30KQ5 88 aa24.82■■□□□ 1.56
TMEM53-205ENST00000372244 TBC1D22AQ8WUA7 517 aa24.82■■□□□ 1.56
TMEM53-205ENST00000372244 ABT1Q9ULW3 272 aaKnown RBP24.82■■□□□ 1.56
TMEM53-205ENST00000372244 AKAP2Q9Y2D5 859 aa24.82■■□□□ 1.56
TMEM53-205ENST00000372244 TLL2Q9Y6L7 1015 aa24.82■■□□□ 1.56
TMEM53-205ENST00000372244 PDE3AQ14432 1141 aa24.81■■□□□ 1.56
TMEM53-205ENST00000372244 DLGAP5Q15398 846 aa24.81■■□□□ 1.56
TMEM53-205ENST00000372244 SAPCD2Q86UD0 394 aa24.81■■□□□ 1.56
TMEM53-205ENST00000372244 COG6Q9Y2V7 657 aa24.81■■□□□ 1.56
TMEM53-205ENST00000372244 GRIK5Q16478 980 aa24.8■■□□□ 1.56
TMEM53-205ENST00000372244 ZBTB40Q9NUA8 1239 aa24.8■■□□□ 1.56
TMEM53-205ENST00000372244 DDX19BQ9UMR2 479 aa24.8■■□□□ 1.56
TMEM53-205ENST00000372244 NOP58Q9Y2X3 529 aaKnown RBP24.8■■□□□ 1.56
TMEM53-205ENST00000372244 TRPM7Q96QT4 1865 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 SPDYE2BA6NHP3 402 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 SPDYE6P0CI01 402 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 ADORA1P30542 326 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 VEGFBP49765 207 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 CHAF1AQ13111 956 aaPredicted RBP24.79■■□□□ 1.56
TMEM53-205ENST00000372244 CFAP100Q494V2 611 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 CEP85Q6P2H3 762 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 PRMT6Q96LA8 375 aaPredicted RBP24.79■■□□□ 1.56
TMEM53-205ENST00000372244 MRIQ9BWK5 157 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 SERPINA10Q9UK55 444 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 TTF2Q9UNY4 1162 aaKnown RBP24.79■■□□□ 1.56
TMEM53-205ENST00000372244 PCDHAC2Q9Y5I4 1007 aa24.79■■□□□ 1.56
TMEM53-205ENST00000372244 A0A1B0GUL7 405 aa24.78■■□□□ 1.56
TMEM53-205ENST00000372244 ZNF408Q9H9D4 720 aa24.78■■□□□ 1.56
TMEM53-205ENST00000372244 GNL3LQ9NVN8 582 aaKnown RBP24.78■■□□□ 1.56
TMEM53-205ENST00000372244 SUGT1Q9Y2Z0 365 aa24.78■■□□□ 1.56
TMEM53-205ENST00000372244 PHKA1P46020 1223 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 C20orf194Q5TEA3 1177 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 CCDC102BQ68D86 513 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.77■■□□□ 1.56
TMEM53-205ENST00000372244 CDCA5Q96FF9 252 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 HHIPL1Q96JK4 782 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 SCAF8Q9UPN6 1271 aaKnown RBP24.77■■□□□ 1.56
TMEM53-205ENST00000372244 HDLBPQ00341 1268 aaKnown RBP24.77■■□□□ 1.56
TMEM53-205ENST00000372244 WDR66Q8TBY9 1149 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 XAGE2Q96GT9 111 aa24.77■■□□□ 1.56
TMEM53-205ENST00000372244 SEMA3EO15041 775 aa24.76■■□□□ 1.55
TMEM53-205ENST00000372244 SURF6O75683 361 aaKnown RBP24.76■■□□□ 1.55
TMEM53-205ENST00000372244 GBA2Q9HCG7 927 aaPredicted RBP24.75■■□□□ 1.55
TMEM53-205ENST00000372244 GPR108Q9NPR9 543 aa24.75■■□□□ 1.55
TMEM53-205ENST00000372244 APOBEC3FQ8IUX4 373 aaKnown RBP24.74■■□□□ 1.55
TMEM53-205ENST00000372244 YTHDC1Q96MU7 727 aaKnown RBP24.74■■□□□ 1.55
TMEM53-205ENST00000372244 CHMP4BQ9H444 224 aaKnown RBP24.74■■□□□ 1.55
TMEM53-205ENST00000372244 DENND2AQ9ULE3 1009 aa24.74■■□□□ 1.55
TMEM53-205ENST00000372244 AOX1Q06278 1338 aa24.74■■□□□ 1.55
TMEM53-205ENST00000372244 RBM5P52756 815 aaKnown RBP eCLIP24.73■■□□□ 1.55
TMEM53-205ENST00000372244 RPAP2Q8IXW5 612 aaPredicted RBP24.73■■□□□ 1.55
TMEM53-205ENST00000372244 C2orf69Q8N8R5 385 aa24.73■■□□□ 1.55
TMEM53-205ENST00000372244 NEUROD6Q96NK8 337 aa24.73■■□□□ 1.55
TMEM53-205ENST00000372244 WDR33Q9C0J8 1336 aaKnown RBP24.73■■□□□ 1.55
TMEM53-205ENST00000372244 COL1A1P02452 1464 aaPredicted RBP24.72■■□□□ 1.55
TMEM53-205ENST00000372244 MYO1BO43795 1136 aa24.72■■□□□ 1.55
TMEM53-205ENST00000372244 CRKP46108 304 aa24.72■■□□□ 1.55
TMEM53-205ENST00000372244 PRAMEF18Q5VWM3 479 aa24.72■■□□□ 1.55
TMEM53-205ENST00000372244 SALL1Q9NSC2 1324 aa24.72■■□□□ 1.55
TMEM53-205ENST00000372244 SIRT2Q8IXJ6 389 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms