RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Vps33aQ9D2N9 598 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tacc3Q9JJ11 631 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Svs3aF2Z472 265 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ppp1r10Q80W00 888 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ncaph2Q8BSP2 607 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rimbp3Q3V0F0 1606 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 ZfxP17012 799 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc57Q6PHN1 1016 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 VmacQ8BP01 174 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fam177a1Q8BR63 207 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc12Q8R344 166 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Spats2lQ91WJ7 558 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc89Q9DA73 370 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Osbpl5Q9ER64 874 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Irgm2A0A140LIF8 407 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 MpripP97434 1024 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 EnahQ03173 802 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc129Q14B48 1034 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccne1Q61457 408 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cc2d1bQ8BRN9 848 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 AdnpQ9Z103 1108 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Npc1l1Q6T3U4 1333 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Atf5O70191 283 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ncapg2Q6DFV1 1138 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Knop1Q9Z2Q2 478 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 PplQ9R269 1755 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Arap3Q8R5G7 1538 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Pibf1E9Q6K3 756 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Eif5P59325 429 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc110Q3V125 848 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Dzip1lQ499E4 774 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Krt23Q99PS0 422 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Stat2Q9WVL2 923 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Abcc4E9Q236 1325 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Casz1Q9CWL2 1761 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 E9QMW4 1145 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Diaph2O70566 1098 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ier5O89113 308 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Spg7Q3ULF4 781 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zkscan4Q5SZT6 480 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fsd1Q7TPM6 496 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rab3gap1Q80UJ7 981 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 GlmnQ8BZM1 596 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Speer4dL7N216 212 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Bach2P97303 839 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 TchpQ3TVW5 497 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nol8Q3UHX0 1147 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nt5c2Q3V1L4 560 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 ZwintQ9CQU5 252 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Uso1Q9Z1Z0 959 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Col15a1O35206 1367 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 CebpzP53569 1052 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cdan1Q8CC12 1239 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tmod2Q9JKK7 351 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nectin2P32507 530 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nlrp1aQ2LKU9 1182 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ice2Q3UZ18 988 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 PsdQ5DTT2 1024 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc157Q5SPX1 718 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zrsr1Q64707 428 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tmem94Q7TSH8 1360 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Abcc10Q8R4P9 1501 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gys2Q8VCB3 704 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Adcy3Q8VHH7 1145 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ddx41Q91VN6 622 aaKnown RBP5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Epb41l3Q9WV92 929 aa5.15□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Api5O35841 504 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Sema3fO88632 785 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Hirip3Q8BLH7 601 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Basp1Q91XV3 226 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Zscan25B2RX31 543 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Calm1P0DP26 149 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Calm2P0DP27 149 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Calm3P0DP28 149 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Zfp51Q3U4L8 781 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Lrrc43Q3V0L5 667 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Pabpn1lQ5XFR0 273 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Skor1Q8BX46 964 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 PpanQ91YU8 470 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Rapgef4Q9EQZ6 1011 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Sos2Q02384 1333 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Gm21680A0A0G2JGR8 267 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Kcna6Q61923 529 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Nap1l4Q78ZA7 375 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Cplx4Q80WM3 160 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Mrpl44Q9CY73 333 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 RabggtaQ9JHK4 567 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Palm3A2TJV2 734 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Btn2a2A4QPC6 514 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Cbfa2t2O70374 594 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Jmjd4Q8BFT6 427 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Hdac9Q99N13 588 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Calml3Q9D6P8 149 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Gm21698A0A087WQP8 267 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Rrp1P56183 494 aaKnown RBP5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 CoilQ5SU73 570 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Mybpc2Q5XKE0 1136 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 SkiQ60698 725 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Npdc1Q64322 332 aa5.15□□□□□ -1.59
Prkdc-201ENSMUST00000023352 Slc5a1Q8C3K6 665 aa5.15□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms