RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Hoxa7P02830 229 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Prkg1P0C605 671 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 LifrP42703 1092 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Tfcp2l1Q3UNW5 479 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Mctp2Q5RJH2 878 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Akap4Q60662 849 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 SkilQ60665 675 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Rab3gap1Q80UJ7 981 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Aldh8a1Q8BH00 487 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 FanclQ9CR14 375 aa13.35□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Phrf1A6H619 1682 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Atg4a-psA0A0G2JFS9 396 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Mageb2A2AHM0 380 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Pde4aO89084 844 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Atg4aQ8C9S8 396 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Edc3Q8K2D3 508 aaKnown RBP13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Slc14a2Q8R4T9 930 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Armcx1Q9CX83 456 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Bcs1lQ9CZP5 418 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Ddx20Q9JJY4 825 aaKnown RBP13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 SisF8VQM5 1818 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Nphp3Q7TNH6 1325 aa13.34□□□□□ -0.27
Tubb1-201ENSMUST00000016399 Ecm29Q6PDI5 1840 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Gm4340L7N2C4 268 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Neurod6P48986 337 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Atp2b3Q0VF55 1220 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Cyp4f37Q3V1F1 546 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 WdpcpQ8C456 722 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ndfip2Q91ZP6 311 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 MsraQ9D6Y7 233 aa13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Zcchc17Q9ESX4 241 aaKnown RBP13.33□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Sept1P42209 366 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Kiaa0753Q6A000 959 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Secisbp2lQ6A098 1086 aaKnown RBP13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Cgnl1Q6AW69 1298 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ift57Q8BXG3 429 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Epc2Q8C0I4 808 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 H2-Q4Q8HWB2 354 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Smarca5Q91ZW3 1051 aaKnown RBP13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Sh3bp5lQ99LH9 392 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Gcc1Q9D4H2 778 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Osbpl5Q9ER64 874 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Peak1Q69Z38 1735 aa13.32□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Timm10P62073 90 aa13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Dll1Q61483 722 aa13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Lrch3Q8BVU0 778 aa13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 4930504O13RikQ8C5Z9 145 aa13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Smc5Q8CG46 1101 aaKnown RBP13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Sf3a1Q8K4Z5 791 aaKnown RBP13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Mrpl12Q9DB15 201 aaKnown RBP13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 ParvgQ9ERD8 331 aa13.31□□□□□ -0.28
Tubb1-201ENSMUST00000016399 TsksO54887 585 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Rhbdl3P58873 404 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ddx31Q6NZQ2 687 aaKnown RBP13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Asap2Q7SIG6 958 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Mxd3Q80US8 206 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Znf18Q810A1 556 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 GorabQ8BRM2 368 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Tmem266Q8BZB3 538 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Cetn4Q8K4K1 168 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Bag3Q9JLV1 577 aaKnown RBP13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Zbtb12Q9Z150 459 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Tbc1d4Q8BYJ6 1307 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Casp1P29452 402 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Wnt10bP48614 389 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Csrnp1P59054 583 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Mcm2P97310 904 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Irf6P97431 467 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ccdc27Q3V036 639 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 DbnlQ62418 436 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ppp1r26Q6A025 1163 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 LdhdQ7TNG8 484 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Kbtbd13Q8C828 458 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Slc26a8Q8R0C3 999 aa13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Rbm33Q9CXK9 1231 aaKnown RBP13.3□□□□□ -0.28
Tubb1-201ENSMUST00000016399 EvplQ9D952 2035 aa13.29□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Cfap44E9Q5M6 1843 aa13.29□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Trpv1Q704Y3 839 aa13.29□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Tanc1Q0VGY8 1856 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Znfx1Q8R151 1909 aaKnown RBP13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Armc3A2AU72 881 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Brd1E9PZ26 1189 aaKnown RBP13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Usp17lbE9Q9U0 468 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Sptlc3Q8BG54 563 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Ufl1Q8CCJ3 793 aaKnown RBP13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Hdac9Q99N13 588 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Aldh1b1Q9CZS1 519 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Cyp46a1Q9WVK8 500 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 S1pr4Q9Z0L1 386 aa13.28□□□□□ -0.28
Tubb1-201ENSMUST00000016399 Slc4a1P04919 929 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Serpinb2P12388 415 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Ppm1jQ149T7 507 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Ccdc51Q3URS9 406 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Abtb2Q7TQI7 1024 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Irs4Q9Z0Y7 1216 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Ccne2Q9Z238 404 aa13.27□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Spryd7Q3TFQ1 196 aa13.26□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Trmt1Q3TX08 663 aa13.26□□□□□ -0.29
Tubb1-201ENSMUST00000016399 HdlbpQ8VDJ3 1268 aaKnown RBP13.26□□□□□ -0.29
Tubb1-201ENSMUST00000016399 Riok1Q922Q2 567 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms