RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ST3GAL6Q9Y274 331 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 PRUNE2Q8WUY3 3088 aa13.91□□□□□ -0.18
PRPF40B-201ENST00000261897 TRAV39A0A0B4J263 110 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 C9J4A7 227 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 ANOS1P23352 680 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 PLA2G5P39877 138 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 FDX2Q6P4F2 183 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 DOK3Q7L591 496 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SNIP1Q8TAD8 396 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SPPL3Q8TCT6 385 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SPIN2AQ99865 258 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SPIN2BQ9BPZ2 258 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 C8orf33Q9H7E9 229 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 FKBP11Q9NYL4 201 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 KIAA1456Q9P272 454 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 COL4A6Q14031 1691 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SERPINE3A8MV23 424 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 CXCL10P02778 98 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 GZMBP10144 247 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 HSD17B7P56937 341 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 MALLQ13021 153 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 CALHM1Q8IU99 346 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 PLA2G2FQ9BZM2 168 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 PLEKHF2Q9H8W4 249 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 CUTCQ9NTM9 273 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 CXorf51AA0A1B0GTR3 108 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 GRIFINA4D1Z8 144 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 SHISA7A6NL88 538 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 THBS4P35443 961 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 NUTF2P61970 127 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 FOXO1Q12778 655 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 PTX4Q96A99 478 aa13.9□□□□□ -0.18
PRPF40B-201ENST00000261897 ABCA1O95477 2261 aa13.9□□□□□ -0.19
PRPF40B-201ENST00000261897 GTF3C1Q12789 2109 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 FAM157AC9JC47 383 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 GNG10P50151 68 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 ZNF92Q03936 586 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 ICAM4Q14773 271 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 IQCJQ1A5X6 159 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 WDFY1Q8IWB7 410 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 TMEM204Q9BSN7 226 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 TK1P04183 234 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 SERPINA7P05543 415 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 COL9A1P20849 921 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 FBLP22087 321 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 PLCXD3Q63HM9 321 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 ERASQ7Z444 233 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 ASB10Q8WXI3 467 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 MMACHCQ9Y4U1 282 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 TRIOO75962 3097 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 NPSP0C0P6 89 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 FUT7Q11130 342 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 HERPUD1Q15011 391 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 FAM78BQ5VT40 261 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 SHDQ96IW2 340 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 ROS1P08922 2347 aa13.89□□□□□ -0.19
PRPF40B-201ENST00000261897 IGHV5-51A0A0C4DH38 117 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 IGKV1-9A0A0C4DH69 117 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 UBE2L5PA0A1B0GUS4 154 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 CBY3A6NI87 242 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 IFNA1P01562 189 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 KRTDAPP60985 99 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 RAET1LQ5VY80 246 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 BTF3L4Q96K17 158 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 SNHG12Q9BXW3 62 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 CFAP54Q96N23 3096 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 DEFA4P12838 97 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 SMAD4Q13485 552 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 GNPNAT1Q96EK6 184 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 OPN3Q9H1Y3 402 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 RNF24Q9Y225 148 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 NPIPA2E9PIF3 369 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 NPIPA3F8WFD2 350 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 S100GP29377 79 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 DPPA3Q6W0C5 159 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 BAGE3Q86Y29 109 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 BAGE2Q86Y30 109 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 ZNF709Q8N972 641 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 TMEM171Q8WVE6 324 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 TXN2Q99757 166 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 GINS3Q9BRX5 216 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 OR51I2Q9H344 312 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 R4GN57 208 aa13.88□□□□□ -0.19
PRPF40B-201ENST00000261897 CD300LBA8K4G0 201 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 K7N7A8 449 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 M0R135 149 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 CLDN1O95832 211 aa13.87□□□□□ -0.19
PRPF40B-201ENST00000261897 CRYAAP02489 173 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms