RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ZNF841Q6ZN19 808 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 ZNF788Q6ZQV5 615 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 Q6ZTK2 550 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 LAX1Q8IWV1 398 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 Q8IYB0 196 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 MFSD4AQ8N468 514 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 BOLLQ8N9W6 283 aaKnown RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 OR11L1Q8NGX0 322 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 OR10R2Q8NGX6 335 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 MBD6Q96DN6 1003 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 SDSLQ96GA7 329 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 DIRAS2Q96HU8 199 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 SDHCQ99643 169 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 TMEM246Q9BRR3 403 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 URM1Q9BTM9 101 aaKnown RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 PECRQ9BY49 303 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 C6orf62Q9GZU0 229 aaPredicted RBP4.97□□□□□ -1.61
USP39-213ENST00000467885 CST11Q9H112 138 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 AUNIPQ9H7T9 357 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 SAP30LQ9HAJ7 183 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 AKIP1Q9NQ31 210 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP39-213ENST00000467885 DIABLOQ9NR28 239 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 ZNF222Q9UK12 451 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 HSF4Q9ULV5 492 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 WIPI2Q9Y4P8 454 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 V9GYH0 126 aa4.97□□□□□ -1.61
USP39-213ENST00000467885 A0A0A6YYH2 397 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 A0A0G2JMP0 313 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 A0A0X1KG70 313 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 hCG_1807616A0A1W2PRN6 198 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 OOEPA6NGQ2 149 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 A6NJ64 397 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 LRRC30A6NM36 301 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 SLC33A1O00400 549 aaPredicted RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 SSX4O60224 188 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PSPNO60542 156 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 ZNF737O75373 536 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 OR2H2O95918 312 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 IGHV2-70P01814 119 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 GYPAP02724 150 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 MT-ND4P03905 459 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PTHLHP12272 177 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 GNB3P16520 340 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PTBP1P26599 531 aaKnown RBP eCLIP4.96□□□□□ -1.62
USP39-213ENST00000467885 CHATP28329 748 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CD80P33681 288 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 MNDAP41218 407 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CEBPDP49716 269 aaPredicted RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 ZNF45Q02386 682 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 COL10A1Q03692 680 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 SCN1BQ07699 218 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 IL13RA2Q14627 380 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 ZMYND11Q15326 602 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 FAM189A2Q15884 450 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 ZNF79Q15937 498 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 MICBQ29980 383 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 MPV17LQ2QL34 196 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 UBE2NLQ5JXB2 153 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 STUMQ69YW2 141 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 RAB12Q6IQ22 244 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 C17orf107Q6ZR85 190 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 C6orf201Q7Z4U5 140 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 LYSMD2Q8IV50 215 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 IZUMO1Q8IYV9 350 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 BPIFB2Q8N4F0 458 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 SUMF2Q8NBJ7 301 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 OR4S1Q8NGB4 309 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 OR4M2Q8NGB6 313 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 OR56B1Q8NGI3 324 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 ST8SIA4Q92187 359 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 EMG1Q92979 244 aaKnown RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 ARHGAP5-AS1Q96IT6 56 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CCL13Q99616 98 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CCL19Q99731 98 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 SULT4A1Q9BR01 284 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 NUDT16L1Q9BRJ7 211 aaKnown RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 TMEM59Q9BXS4 323 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 GSX2Q9BZM3 304 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CXorf56Q9H5V9 222 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 CHODLQ9H9P2 273 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 ZMAT3Q9HA38 289 aaKnown RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 RCC2Q9P258 522 aaKnown RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 NLKQ9UBE8 527 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 KAAG1Q9UBP8 84 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 EXTL2Q9UBQ6 330 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PLEKHA6Q9Y2H5 1048 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 MRPS7Q9Y2R9 242 aaKnown RBP4.96□□□□□ -1.62
USP39-213ENST00000467885 NPTNQ9Y639 398 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PKDREJQ9NTG1 2253 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 PLCE1Q9P212 2302 aa4.96□□□□□ -1.62
USP39-213ENST00000467885 FASNP49327 2511 aaKnown RBP4.95□□□□□ -1.62
USP39-213ENST00000467885 CENPEQ02224 2701 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 TRAV38-1A0A0B4J264 116 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 A0A1B0GW55 424 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 MEIOCA2RUB1 952 aa4.95□□□□□ -1.62
USP39-213ENST00000467885 FAM25AB3EWG3 89 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms