RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 KCNE5Q9UJ90 142 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 TRGV8A0A0C4DH27 118 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CSN1S1P47710 185 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 IL24Q13007 206 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 GFRALQ6UXV0 394 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 C17orf78Q8N4C9 275 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 BSCL2Q96G97 398 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CHRDL1Q9BU40 450 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 NDUFB3O43676 98 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 MPGP29372 298 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 EFNB2P52799 333 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 PMS2CLQ68D20 193 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CXorf67Q86X51 503 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 UBALD1Q8TB05 177 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 GPR137Q96N19 417 aa10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1-201ENST00000370966 BRCA1P38398 1863 aaKnown RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TRAV20A0A0B4J274 112 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 A0A0U1RQV5 110 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 FAM24AA6NFZ4 105 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TRDCB7Z8K6 153 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TRAF3IP2O43734 574 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 LYZL6O75951 148 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 SLC38A11Q08AI6 406 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 FOXO1Q12778 655 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 RPL7L1Q6DKI1 246 aaKnown RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 STPG2Q8N412 459 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 OR5A2Q8NGI9 324 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 RFESDQ8TAC1 157 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 FSCN3Q9NQT6 498 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 CDS2O95674 445 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 PNPP00491 289 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 P2RY1P47900 373 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 ATP6V1FQ16864 119 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TEX30Q5JUR7 227 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 PHYHD1Q5SRE7 291 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 DBX2Q6ZNG2 339 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TUSC5Q8IXB3 177 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 OR5D13Q8NGL4 314 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 CXXC4Q9H2H0 198 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 GPR27Q9NS67 375 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 GEMIN2O14893 280 aaKnown RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 PPYP01298 95 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TMIGD3P0DMS9 266 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 CCL2P13500 99 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF83P51522 516 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 IGLV3-21P80748 117 aaPredicted RBP10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF429Q86V71 674 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 HOGA1Q86XE5 327 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 TGIF2Q9GZN2 237 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 SMOC1Q9H4F8 434 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 NARFLQ9H6Q4 476 aa10.42□□□□□ -0.74
DEPDC1-201ENST00000370966 J3QT63 122 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 VMA21Q3ZAQ7 101 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 CHRNA10Q9GZZ6 450 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 DEFB124Q8NES8 71 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 LRRC29Q8WV35 223 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 TMEM56Q96MV1 263 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 MYOZ1Q9NP98 299 aaPredicted RBP10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 PSG11Q9UQ72 335 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 R4GN57 208 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 LTBP1Q14766 1721 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 A0A1W2PR80 420 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 OR3A1P47881 315 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 AARDQ4LEZ3 155 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 SEZ6L2Q6UXD5 910 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 TMEM108Q6UXF1 575 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 RFLNBQ8N5W9 214 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 ABHD3Q8WU67 409 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF385AQ96PM9 386 aaKnown RBP10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 SLC2A9Q9NRM0 540 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 CEP250Q9BV73 2442 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 UPK3AO75631 287 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 KLF3P57682 345 aaPredicted RBP10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF345Q14585 488 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 ADIPOR1Q96A54 375 aa10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
DEPDC1-201ENST00000370966 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 A0A0J9YW62 118 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 FCGR3BO75015 233 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 ISG15P05161 165 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 DCAF10Q5QP82 559 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 OR5B3Q8NH48 314 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 CLDN34H7C241 214 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 ANKRD34CP0C6C1 535 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 MAGEA5P43359 124 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 VAX1Q5SQQ9 334 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 C1orf100Q5SVJ3 147 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 UNQ9370/PRO34162Q6UXP9 181 aa10.4□□□□□ -0.74
DEPDC1-201ENST00000370966 BVESQ8NE79 360 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 350.4 ms