RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 DOCK11Q5JSL3 2073 aa8.33□□□□□ -1.08
TPM4-207ENST00000588032 IGHV1-69DA0A0B4J2H0 117 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 CENPVL3A0A0U1RRI6 287 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 F8VVB4 439 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 F8VWA3 439 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 RGS10O43665 173 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ZNF737O75373 536 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 INMTO95050 263 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 VENTXO95231 258 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 HAND1O96004 215 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 IGHV1-69P01742 117 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 TFF1P04155 84 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 IGHV4-38-2P0DP08 117 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 BCL3P20749 454 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 CRHBPP24387 322 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 MAPK3P27361 379 aaPredicted RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 BDKRB2P30411 391 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 NPBWR2P48146 333 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ZP1P60852 638 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 RPS11P62280 158 aaKnown RBP eCLIP8.32□□□□□ -1.08
TPM4-207ENST00000588032 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 COL10A1Q03692 680 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 RBM48Q5RL73 367 aaKnown RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 NCR3LG1Q68D85 454 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ELP2Q6IA86 826 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 GDPD3Q7L5L3 318 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 VMO1Q7Z5L0 202 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 CDH26Q8IXH8 852 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 OR8H2Q8N162 312 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 BATF2Q8N1L9 274 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ZFP41Q8N8Y5 198 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ASCC1Q8N9N2 400 aaKnown RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 C22orf15Q8WYQ4 148 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 RFT1Q96AA3 541 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 SPACA5Q96QH8 159 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 PRDM13Q9H4Q3 707 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ZMAT3Q9HA38 289 aaKnown RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 PCDHB16Q9NRJ7 776 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 RBFOX1Q9NWB1 397 aaKnown RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 PAK1IP1Q9NWT1 392 aaPredicted RBP8.32□□□□□ -1.08
TPM4-207ENST00000588032 TAS2R4Q9NYW5 299 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 FOXJ3Q9UPW0 622 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 ZFHX3Q15911 3703 aa8.32□□□□□ -1.08
TPM4-207ENST00000588032 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 FUOMA2VDF0 154 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 ANGPTL7O43827 346 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 PRKACAP17612 351 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 IGFBP3P17936 291 aaPredicted RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 FSTP19883 344 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 PRTN3P24158 256 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 LMO1P25800 156 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 ZNF93P35789 620 aaPredicted RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 TGFBR2P37173 567 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 MTNR1BP49286 362 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 CEBPDP49716 269 aaPredicted RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 MEF2CQ06413 473 aaPredicted RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 IRF3Q14653 427 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 MED22Q15528 200 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 TMEM200BQ69YZ2 307 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 ASPHD2Q6ICH7 369 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 CRIP3Q6Q6R5 217 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 ASCL4Q6XD76 172 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 PRSS48Q7RTY5 328 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 SATL1Q86VE3 508 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 FAM185AQ8N0U4 392 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 BCL6BQ8N143 479 aaPredicted RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 SIGLECL1Q8N7X8 197 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 Q8NFD4 153 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 OR52N4Q8NGI2 321 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 OR51A2Q8NGJ7 313 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 FAM216AQ8WUB2 273 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 LHX4Q969G2 390 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 CNBD2Q96M20 576 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 EXOSC4Q9NPD3 245 aaKnown RBP8.31□□□□□ -1.08
TPM4-207ENST00000588032 ISYNA1Q9NPH2 558 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 NOX4Q9NPH5 578 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 WNK2Q9Y3S1 2297 aa8.31□□□□□ -1.08
TPM4-207ENST00000588032 TRBV5-7A0A0A0MS05 114 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 MEGF11A6BM72 1044 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 CLDN34H7C241 214 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 GABRPO00591 440 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 MGST3O14880 152 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 DENRO43583 198 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 MRPS14O60783 128 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 ZNF780AO75290 641 aaPredicted RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 EEF1B2P24534 225 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 ERP29P30040 261 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 PTGFRP43088 359 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 UBE2E1P51965 193 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 BAMBIQ13145 260 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 DOC2BQ14184 412 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 GPR176Q14439 515 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 RSU1Q15404 277 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 DDI2Q5TDH0 399 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms