RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RASSF6Q6ZTQ3 369 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 FBXO16Q8IX29 292 aaPredicted RBP5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 SPACA3Q8IXA5 215 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 BPIFB2Q8N4F0 458 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ZADH2Q8N4Q0 377 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 MS4A15Q8N5U1 240 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF614Q8N883 585 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 OR4C13Q8NGP0 309 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ARRDC2Q8TBH0 407 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 PTX4Q96A99 478 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 FBXL8Q96CD0 374 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ISOC1Q96CN7 298 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 RNF183Q96D59 192 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 SCMH1Q96GD3 660 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ZC3HAV1LQ96H79 300 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 HSFY1Q96LI6 401 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 HSPB9Q9BQS6 159 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 DUSP23Q9BVJ7 150 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 MAGIXQ9H6Y5 334 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 A4GALTQ9NPC4 353 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 ACP6Q9NPH0 428 aa5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 RBFOX1Q9NWB1 397 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 MRPL16Q9NX20 251 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-208ENST00000474246 NBASA2RRP1 2371 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 SIPA1L3O60292 1781 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 LRBAP50851 2863 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 WDFY3Q8IZQ1 3526 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 MICAL3Q7RTP6 2002 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 A1L4Q6 167 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM189A5PLL7 270 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM74A7A6NL05 159 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 A8MVM7 634 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 E7EQ34 232 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 AIPO00170 330 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 TAAR5O14804 337 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 CRXO43186 299 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 GYPCP04921 128 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 ABOP16442 354 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 PSMB1P20618 241 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 NKX2-1P43699 371 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 MEOX1P50221 254 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 ERVFC1-1P60608 527 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 MRPS6P82932 125 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 CD164Q04900 197 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 PPP1R1AQ13522 171 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 PMVKQ15126 192 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 C4orf26Q17RF5 130 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 HLA-DRB5Q30154 266 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 TP53I3Q53FA7 332 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 DMKNQ6E0U4 476 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC25A47Q6Q0C1 308 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 CBLL1Q75N03 491 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC35F2Q8IXU6 374 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 ARL14EPQ8N8R7 260 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 BEST4Q8NFU0 473 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 OR11H4Q8NGC9 324 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 OR4N2Q8NGD1 307 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 OR1J2Q8NGS2 313 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNRF2Q8NHG8 242 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 FGF11Q92914 225 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 OXGR1Q96P68 337 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 GNRHR2Q96P88 292 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 CABLES2Q9BTV7 478 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 DOHHQ9BU89 302 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 PRRG4Q9BZD6 226 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 FGF20Q9NP95 211 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 SCN3BQ9NY72 215 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 ST3GAL6Q9Y274 331 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 KLHDC2Q9Y2U9 406 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 TET1Q8NFU7 2136 aa5.22□□□□□ -1.57
SMARCE1-208ENST00000474246 LRIT2A6NDA9 550 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM166BA8MTA8 275 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 AMBPP02760 352 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 DBIP07108 87 aaKnown RBP5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 FGF2P09038 288 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 ALDOCP09972 364 aaKnown RBP5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 H2BFMP0C1H6 154 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 SMIM17P0DL12 118 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 KDELR1P24390 212 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 ITGB7P26010 798 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 XGP55808 180 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 SNRPD1P62314 119 aaKnown RBP5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 HIST1H3AP68431 136 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 DCDP81605 110 aaKnown RBP5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 H3F3AP84243 136 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 CAV1Q03135 178 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM53BQ14153 422 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 ATXN7L3Q14CW9 347 aaPredicted RBP5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 GUSBP1Q15486 140 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM241Q24JQ0 296 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 TPTE2P1Q5T6R2 138 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 TBPL2Q6SJ96 375 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 FBXW12Q6X9E4 464 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 PQLC2Q6ZP29 291 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 HIST2H3AQ71DI3 136 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 ANKRD37Q7Z713 158 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 DTX2Q86UW9 622 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 KLHDC8BQ8IXV7 354 aa5.21□□□□□ -1.57
SMARCE1-208ENST00000474246 UMODL1-AS1Q8N2C9 162 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms