RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 TRBV4-1A0A0J9YWV2 114 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SMIM31A0A1B0GVY4 71 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 NPIPB9F8W1W9 429 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 hCG_2039718K7EN88 272 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CCL21O00585 134 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 HSD17B6O14756 317 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZNHIT1O43257 154 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 EDF1O60869 148 aaKnown RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 RBMXL2O75526 392 aaKnown RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 JTBO76095 146 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 OR7A10O76100 309 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 UTS2O95399 124 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 IFNA5P01569 189 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 RNF224P0DH78 156 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 EFNA1P20827 205 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 FASP25445 335 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 GDF1P27539 372 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CFPP27918 469 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SSTR2P30874 369 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 HOXD3P31249 432 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 S100A3P33764 101 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ATP4BP51164 291 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 NKX2-5P52952 324 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CDH11P55287 796 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ERVS71-1P61550 626 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SEC61A1P61619 476 aaKnown RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 DHODHQ02127 395 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 POU3F1Q03052 451 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SCRN3Q0VDG4 424 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 RAB40BQ12829 278 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 TIGITQ495A1 244 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZNF672Q499Z4 452 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SPANXN4Q5MJ08 99 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 FFAR4Q5NUL3 377 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SAXO2Q658L1 398 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 XKRXQ6PP77 449 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 APOOLQ6UXV4 268 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 C6orf120Q7Z4R8 191 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CLECL1Q8IZS7 167 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZSCAN4Q8NAM6 433 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 OR1S2Q8NGQ3 325 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 OR4C3Q8NH37 302 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ITLN2Q8WWU7 325 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CDS1Q92903 461 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SARAFQ96BY9 339 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 NEURL3Q96EH8 262 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 OR7D2Q96RA2 312 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 HOXD1Q9GZZ0 328 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 FNDC4Q9H6D8 234 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 UBQLN4Q9NRR5 601 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 EIF3KQ9UBQ5 218 aaKnown RBP4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 CYB5R1Q9UHQ9 305 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 SLC7A7Q9UM01 511 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 PRR14LQ5THK1 2151 aa4.48□□□□□ -1.69
HMGB3P7-201ENST00000400214 ALPK2Q86TB3 2170 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 HRNRQ86YZ3 2850 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 A0A0A6YYD4 124 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 TRGV8A0A0C4DH27 118 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 FAM231BA6NCW3 169 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 TMEM238C9JI98 176 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 H3BMQ9 156 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 DCTN6O00399 190 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 SIGLEC5O15389 551 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 CDC40O60508 579 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZG16O60844 167 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 CLDN1O95832 211 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ANGPTL1O95841 491 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 OCM2P0CE71 109 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 GABRA1P14867 456 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZP3P21754 424 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 POLR2JP52435 117 aaKnown RBP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 AQP5P55064 265 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 DSCR4P56555 118 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 NCALDP61601 193 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 S100A12P80511 92 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 LTBQ06643 244 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 RIGQ13278 110 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 LAGE3Q14657 143 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ZNF141Q15928 474 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ATP6V1FQ16864 119 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 VMACQ2NL98 169 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ARHGAP11BQ3KRB8 267 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 SLC36A2Q495M3 483 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 EIPR1Q53HC9 387 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 CYBRD1Q53TN4 286 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 TIMM23BQ5SRD1 257 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 DCST2Q5T1A1 773 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 METTL21CQ5VZV1 264 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 Q6ZVQ6 151 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 SSX6Q7RTT6 188 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ATG4DQ86TL0 474 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 HIPK1Q86Z02 1210 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ODF3L1Q8IXM7 274 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 RNF113BQ8IZP6 322 aaKnown RBP4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 GVQW1Q8N7I0 195 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 COX18Q8N8Q8 333 aa4.47□□□□□ -1.69
HMGB3P7-201ENST00000400214 ACBD4Q8NC06 268 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms