RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Olfr536Q8VFE9 307 aa18.02■□□□□ 0.48
Trim47-201ENSMUST00000021120 Polr2hQ923G2 150 aa18.02■□□□□ 0.48
Trim47-201ENSMUST00000021120 Emc4Q9CZX9 183 aa18.02■□□□□ 0.48
Trim47-201ENSMUST00000021120 Cldn12Q9ET43 244 aa18.02■□□□□ 0.48
Trim47-201ENSMUST00000021120 TprF6ZDS4 2431 aaKnown RBP18.02■□□□□ 0.48
Trim47-201ENSMUST00000021120 Obp1bA2AEP0 171 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm14743A2BHD2 171 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Lipo5F6QKH6 233 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Vmn1r120K7N6J6 305 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 H2-Ab1P01921 265 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 P06344 263 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 GifP52787 417 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Bmp8bP55105 399 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 CdaP56389 146 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Rnase12Q5GAM8 145 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 GcsamQ6RFH4 181 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr967Q7TRA6 310 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Pgm2Q7TSV4 620 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Znf8Q8BGV5 572 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Psmf1Q8BHL8 271 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Alkbh7Q9D6Z0 221 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 GnmtQ9QXF8 293 aa18.02■□□□□ 0.47
Trim47-201ENSMUST00000021120 Spg11Q3UHA3 2430 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Fam90a1aA2A4E2 429 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Tmem185aA2AF53 350 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm17677B3GLJ5 116 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Vmn1r152E9Q9N3 307 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm3685J3QPP2 205 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Vmn1r104L7N293 307 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Rad51dO55230 329 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Klk1b1P00755 261 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 P01680 129 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 H2-LP01897 362 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Hbb-bh1P04444 147 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gpr83P30731 423 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 GastP48757 101 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Rnft2Q3UF64 445 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 ShhQ62226 437 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 SordQ64442 357 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Parp16Q7TMM8 322 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr714Q7TRN0 317 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Fndc9Q8BJN4 226 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Vmn1r208Q8R275 308 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr214Q8VG27 320 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 BlvrbQ923D2 206 aaKnown RBP18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Cir1Q9DA19 450 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 IcaQ9DBD0 700 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Paqr4Q9JJE4 273 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Riox1Q9JJF3 603 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Tmem9bQ9JJR8 199 aa18.01■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr911-ps1A0A140T8K0 311 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Igkv6-14A0A140T8P1 115 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr1205A2ATJ7 307 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Mex3aG3UYU0 520 aaKnown RBP18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm3033M0QWI0 180 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm3532M0QWL4 194 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Il2rgP34902 369 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Ccr2P51683 373 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Fam220aQ3ZN08 260 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Psg26Q4KL65 475 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr1212Q7TR08 311 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Znf2Q8BIQ3 427 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Cdhr3Q8BL00 831 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Ldlrad4Q8BWJ4 306 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr1254Q8VFB1 314 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr1497Q8VG11 314 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr922Q8VG50 311 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr646Q8VGW2 312 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Lpcat3Q91V01 487 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Med6Q921D4 246 aaKnown RBP18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Tmem33Q9CR67 247 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Xrcc2Q9CX47 278 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Samt4Q9D4X6 233 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Tlnrd1Q9ERE8 362 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Wnt16Q9QYS1 364 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Lhx6Q9R1R0 363 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Cfap46E9Q2C0 2641 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Il11ra1Q64385 432 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 LmlnQ8BMN4 681 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Tmed4Q8R1V4 227 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Vmn1r23Q8R2D0 302 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Snapc5Q8R2K7 98 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Mitd1Q8VDV8 249 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Nop16Q9CPT5 178 aaKnown RBP18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Arpc5Q9CPW4 151 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Olfr710Q9EP55 310 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Pde7bQ9QXQ1 446 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 PthQ9Z0L6 115 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Eml6Q5SQM0 1958 aa18■□□□□ 0.47
Trim47-201ENSMUST00000021120 Trav12n-2A0A075B626 113 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Igkv9-124A0A0G2JDR3 117 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm3543D3Z235 184 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm8871F7AXK2 190 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Bcl2l11O54918 196 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 ApelaP0DMC4 54 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gstp2P46425 210 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Fbxo31Q3TQF0 507 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 SrmsQ62270 496 aa17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Rps27Q6ZWU9 84 aaKnown RBP17.99■□□□□ 0.47
Trim47-201ENSMUST00000021120 Gm5111Q8C9M4 190 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 118.8 ms