Protein–RNA interactions for Protein: Q8R275

Vmn1r208, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r208Q8R275 Gm25239-201ENSMUST00000174915 86 ntBASIC33.18■■■□□ 2.9
Vmn1r208Q8R275 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Vmn1r208Q8R275 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Vmn1r208Q8R275 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Vmn1r208Q8R275 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Vmn1r208Q8R275 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Vmn1r208Q8R275 Gm15042-201ENSMUST00000120212 883 ntBASIC29.5■■■□□ 2.31
Vmn1r208Q8R275 Gm15045-201ENSMUST00000117359 883 ntBASIC28.89■■■□□ 2.22
Vmn1r208Q8R275 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Vmn1r208Q8R275 Psd-208ENSMUST00000224556 2034 ntBASIC28.67■■■□□ 2.18
Vmn1r208Q8R275 Gm24109-201ENSMUST00000175489 103 ntBASIC28.51■■■□□ 2.15
Vmn1r208Q8R275 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Vmn1r208Q8R275 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.3■■■□□ 2.12
Vmn1r208Q8R275 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vmn1r208Q8R275 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vmn1r208Q8R275 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Vmn1r208Q8R275 Gm23366-201ENSMUST00000175022 89 ntBASIC27.84■■■□□ 2.05
Vmn1r208Q8R275 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vmn1r208Q8R275 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vmn1r208Q8R275 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Vmn1r208Q8R275 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Vmn1r208Q8R275 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Vmn1r208Q8R275 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Vmn1r208Q8R275 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Vmn1r208Q8R275 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Vmn1r208Q8R275 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Vmn1r208Q8R275 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Vmn1r208Q8R275 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.59■■■□□ 2.01
Vmn1r208Q8R275 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vmn1r208Q8R275 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vmn1r208Q8R275 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vmn1r208Q8R275 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vmn1r208Q8R275 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.3■■□□□ 1.96
Vmn1r208Q8R275 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Vmn1r208Q8R275 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Vmn1r208Q8R275 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.06■■□□□ 1.92
Vmn1r208Q8R275 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Vmn1r208Q8R275 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Vmn1r208Q8R275 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.85■■□□□ 1.89
Vmn1r208Q8R275 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Vmn1r208Q8R275 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Vmn1r208Q8R275 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vmn1r208Q8R275 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.51■■□□□ 1.83
Vmn1r208Q8R275 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vmn1r208Q8R275 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.47■■□□□ 1.83
Vmn1r208Q8R275 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Vmn1r208Q8R275 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vmn1r208Q8R275 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vmn1r208Q8R275 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.35■■□□□ 1.81
Vmn1r208Q8R275 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vmn1r208Q8R275 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r208Q8R275 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vmn1r208Q8R275 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r208Q8R275 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Vmn1r208Q8R275 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
Vmn1r208Q8R275 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Vmn1r208Q8R275 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vmn1r208Q8R275 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Vmn1r208Q8R275 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vmn1r208Q8R275 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.02■■□□□ 1.76
Vmn1r208Q8R275 Gm25238-201ENSMUST00000174914 89 ntBASIC26.01■■□□□ 1.75
Vmn1r208Q8R275 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.96■■□□□ 1.75
Vmn1r208Q8R275 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Vmn1r208Q8R275 Gm27325-201ENSMUST00000175467 74 ntBASIC25.94■■□□□ 1.74
Vmn1r208Q8R275 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Vmn1r208Q8R275 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Vmn1r208Q8R275 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vmn1r208Q8R275 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Vmn1r208Q8R275 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.89■■□□□ 1.74
Vmn1r208Q8R275 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vmn1r208Q8R275 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.8■■□□□ 1.72
Vmn1r208Q8R275 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.77■■□□□ 1.72
Vmn1r208Q8R275 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Vmn1r208Q8R275 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
Vmn1r208Q8R275 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Vmn1r208Q8R275 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vmn1r208Q8R275 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vmn1r208Q8R275 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.46■■□□□ 1.67
Vmn1r208Q8R275 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r208Q8R275 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Vmn1r208Q8R275 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.42■■□□□ 1.66
Vmn1r208Q8R275 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r208Q8R275 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.41■■□□□ 1.66
Vmn1r208Q8R275 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Vmn1r208Q8R275 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Vmn1r208Q8R275 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.37■■□□□ 1.65
Vmn1r208Q8R275 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r208Q8R275 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Vmn1r208Q8R275 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Vmn1r208Q8R275 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Vmn1r208Q8R275 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Vmn1r208Q8R275 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vmn1r208Q8R275 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Vmn1r208Q8R275 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Vmn1r208Q8R275 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vmn1r208Q8R275 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vmn1r208Q8R275 Rab21-202ENSMUST00000218831 843 ntBASIC25.18■■□□□ 1.62
Vmn1r208Q8R275 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Vmn1r208Q8R275 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Vmn1r208Q8R275 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms