RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 EBI3Q14213 229 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 CLLU1OSQ5K130 101 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 MORN3Q6PF18 240 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 UGT2A3Q6UWM9 527 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 LRRC6Q86X45 466 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF695Q8IW36 515 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLC35G3Q8N808 338 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR8G5Q8NG78 346 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR9A2Q8NGT5 310 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 ORAOV1Q8WV07 137 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 L3HYPDHQ96EM0 354 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 BIRC8Q96P09 236 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 RNF157Q96PX1 679 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 MED10Q9BTT4 135 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 BEX2Q9BXY8 128 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 ABCB9Q9NP78 766 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 DNAJC27Q9NZQ0 273 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 SNX24Q9Y343 169 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 CBY1Q9Y3M2 126 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 PCM1Q15154 2024 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 LRPPRCP42704 1394 aaKnown RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 ADAMTSL3P82987 1691 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 IGHV1-3A0A0C4DH29 117 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 NDUFS6O75380 124 aaKnown RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 CDK14O94921 469 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 HLA-DQB1P01920 261 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 HLA-GP17693 338 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 RPA3P35244 121 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 GCLMP48507 274 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 TTPAP49638 278 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 SLC18A1P54219 525 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 PMVKQ15126 192 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 PTGES3Q15185 160 aaKnown RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 MAPRE2Q15555 327 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 CEACAM21Q3KPI0 293 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 LINC00483Q53H64 154 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF101Q8IZC7 436 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 OR7G1Q8NGA0 311 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 SYNPRQ8TBG9 265 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 CPNE4Q96A23 557 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 QKIQ96PU8 341 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 DOK1Q99704 481 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 TSGA10Q9BZW7 698 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 RBM22Q9NW64 420 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 C21orf62Q9NYP8 219 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 STX18Q9P2W9 335 aaKnown RBP3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 ENPP4Q9Y6X5 453 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 URGCP-MRPS24S4R325 110 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 SCN1AP35498 2009 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 ARID1AO14497 2285 aa3.27□□□□□ -1.89
HMGB1P47-201ENST00000511281 KIAA0232Q92628 1395 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 RB1CC1Q8TDY2 1594 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 A0A1B0GXF2 115 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ISPDA4D126 451 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 TRPC5OSA6NMA1 111 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 UPK2O00526 184 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 SCO1O75880 301 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 CYB5R3P00387 301 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF806P0C7X5 589 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 PSMB6P28072 239 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 CRATP43155 626 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 PMS2P3Q13401 168 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 TRAM1Q15629 374 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 TMEM249Q2WGJ8 235 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNF404Q494X3 552 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ATP6AP1LQ52LC2 224 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 RBM48Q5RL73 367 aaKnown RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 KCTD16Q68DU8 428 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ORMDL3Q8N138 153 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 CCNYL1Q8N7R7 359 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 OR52N1Q8NH53 320 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 LRRC45Q96CN5 670 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZMYND19Q96E35 227 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 SMIM8Q96KF7 97 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 CDX2Q99626 313 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 SPIN2AQ99865 258 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 SPIN2BQ9BPZ2 258 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 BBS2Q9BXC9 721 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 TBL1XR1Q9BZK7 514 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 LHX5Q9H2C1 402 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZSCAN16Q9H4T2 348 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 CA10Q9NS85 328 aa3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 ZNHIT6Q9NWK9 470 aaKnown RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 NOSIPQ9Y314 301 aaKnown RBP3.26□□□□□ -1.89
HMGB1P47-201ENST00000511281 A0A0G2JMP0 313 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 A0A0X1KG70 313 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 UBDO15205 165 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 ENSAO43768 121 aaKnown RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 CALUO43852 315 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 CBR3O75828 277 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 MPZL1O95297 269 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 MAS1P04201 325 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SNRPAP09012 282 aaKnown RBP3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 TAC1P20366 129 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 SYT1P21579 422 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 KDELR2P33947 212 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 UGT2B10P36537 528 aa3.25□□□□□ -1.89
HMGB1P47-201ENST00000511281 XKP51811 444 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms