RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tmem222Q8BVA2 208 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nsun5Q8K4F6 465 aaKnown RBP14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 PnpoQ91XF0 261 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tspan31Q9CQ88 210 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cdc42ep3Q9CQC5 254 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trp53tg5Q9D976 238 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pm20d2A3KG59 431 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn1r152E9Q9N3 307 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn1r104L7N293 307 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Alx4O35137 399 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ccl9P51670 122 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cpeb1P70166 561 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 BglapP86546 95 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Bglap2P86547 95 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Hoxc4Q08624 264 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc25a33Q3TZX3 320 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Bdh1Q80XN0 343 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gtdc1Q8BW56 445 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp874aQ8BX23 447 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr502Q8VG09 314 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rab4bQ91ZR1 213 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 RhebQ921J2 184 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 PbkQ9JJ78 330 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 St6galnac5Q9QYJ1 336 aa14.1□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp69A2A761 587 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Has2P70312 552 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gpr160Q3U3F9 336 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm525Q3V3I5 90 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr11Q60890 313 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rpusd1Q8VCZ8 306 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Sectm1aQ921W8 192 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Btf3l4Q9CQH7 158 aaKnown RBP14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rps21Q9CQR2 83 aaKnown RBP14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Borcs7Q9CRC6 105 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tbl1xQ9QXE7 527 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pde4dipQ80YT7 2224 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trav10nA0A075B622 114 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trav10A0A075B642 114 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Bmi1P25916 324 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nkx2-2P42586 273 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 QpctlQ8BH73 383 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nob1Q8BW10 403 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tnfsfm13Q8BXS2 410 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1163Q8VFR4 316 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mrm2Q9CPY0 246 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SlirpQ9D8T7 112 aaKnown RBP14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 DhdhQ9DBB8 333 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SpdefQ9WTP3 325 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lrit3W8DXL4 681 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 AI182371A2AS37 356 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Vmn2r58K7N6V2 862 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mtco2P00405 227 aaKnown RBP14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 CtgfP29268 348 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ackr3P56485 362 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Agbl4Q09LZ8 540 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc24a4Q8CGQ8 622 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc25a42Q8R0Y8 318 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 GcaQ8VC88 220 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lrrc26Q91W20 331 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 P2ry14Q9ESG6 338 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Adamdec1Q9R0X2 467 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Wif1Q9WUA1 379 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm17655A0A1B0GT13 591 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 1700080E11RikE9Q9G1 206 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Yjefn3F6W8I0 251 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Bglap3P54615 95 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pcbd1P61458 104 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Acp5Q05117 327 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1474Q7TQQ8 314 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1110Q8VG38 312 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dmac2Q9D7K5 258 aaKnown RBP14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Eif3fQ9DCH4 361 aa14.09□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trabd2bB1ATG9 517 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 D7Ertd443eD2J0Y4 644 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr417F8VQB1 309 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 GbaP17439 515 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 LepP41160 167 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Fam212bQ80VY2 300 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Flywch1Q8CI03 673 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1497Q8VG11 314 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Phospho2Q9D9M5 241 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mmp1bQ9EPL6 463 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CorinQ9Z319 1113 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dock8Q8C147 2100 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 LctF8VPT3 1931 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1082A0A1L1SUC9 313 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 DytnA2CI98 653 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 PlatP11214 559 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ly6fP35460 134 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gabrr1P56475 480 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Barhl1P63157 327 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 ApoolQ78IK4 265 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr645Q7TRQ1 315 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Nmnat2Q8BNJ3 307 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dzank1Q8C008 778 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Agpat2Q8K3K7 278 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r66Q8K4I0 310 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Alg12Q8VDB2 486 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 HaghQ99KB8 309 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 PsphQ99LS3 225 aa14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 89.9 ms