Protein–RNA interactions for Protein: F6W8I0

Yjefn3, YjeF N-terminal domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yjefn3F6W8I0 Gm25239-201ENSMUST00000174915 86 ntBASIC32.05■■■□□ 2.72
Yjefn3F6W8I0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Yjefn3F6W8I0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Yjefn3F6W8I0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Yjefn3F6W8I0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Yjefn3F6W8I0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Yjefn3F6W8I0 Gm15042-201ENSMUST00000120212 883 ntBASIC28.46■■■□□ 2.15
Yjefn3F6W8I0 Gm15045-201ENSMUST00000117359 883 ntBASIC27.87■■■□□ 2.05
Yjefn3F6W8I0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Yjefn3F6W8I0 Psd-208ENSMUST00000224556 2034 ntBASIC27.74■■■□□ 2.03
Yjefn3F6W8I0 Gm24109-201ENSMUST00000175489 103 ntBASIC27.54■■■□□ 2
Yjefn3F6W8I0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Yjefn3F6W8I0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Yjefn3F6W8I0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.31■■□□□ 1.96
Yjefn3F6W8I0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Yjefn3F6W8I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Yjefn3F6W8I0 Gm23366-201ENSMUST00000175022 89 ntBASIC26.85■■□□□ 1.89
Yjefn3F6W8I0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Yjefn3F6W8I0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Yjefn3F6W8I0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Yjefn3F6W8I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Yjefn3F6W8I0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Yjefn3F6W8I0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Yjefn3F6W8I0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Yjefn3F6W8I0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Yjefn3F6W8I0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Yjefn3F6W8I0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Yjefn3F6W8I0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.57■■□□□ 1.84
Yjefn3F6W8I0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Yjefn3F6W8I0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Yjefn3F6W8I0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Yjefn3F6W8I0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.3■■□□□ 1.8
Yjefn3F6W8I0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Yjefn3F6W8I0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Yjefn3F6W8I0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Yjefn3F6W8I0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Yjefn3F6W8I0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.14■■□□□ 1.78
Yjefn3F6W8I0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Yjefn3F6W8I0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Yjefn3F6W8I0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Yjefn3F6W8I0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.84■■□□□ 1.73
Yjefn3F6W8I0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Yjefn3F6W8I0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.57■■□□□ 1.68
Yjefn3F6W8I0 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.56■■□□□ 1.68
Yjefn3F6W8I0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Yjefn3F6W8I0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Yjefn3F6W8I0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Yjefn3F6W8I0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Yjefn3F6W8I0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.47■■□□□ 1.67
Yjefn3F6W8I0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Yjefn3F6W8I0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Yjefn3F6W8I0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Yjefn3F6W8I0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Yjefn3F6W8I0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Yjefn3F6W8I0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Yjefn3F6W8I0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Yjefn3F6W8I0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
Yjefn3F6W8I0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Yjefn3F6W8I0 Gm25238-201ENSMUST00000174914 89 ntBASIC25.13■■□□□ 1.61
Yjefn3F6W8I0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Yjefn3F6W8I0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.1■■□□□ 1.61
Yjefn3F6W8I0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.08■■□□□ 1.6
Yjefn3F6W8I0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Yjefn3F6W8I0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
Yjefn3F6W8I0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Yjefn3F6W8I0 Gm27325-201ENSMUST00000175467 74 ntBASIC25■■□□□ 1.59
Yjefn3F6W8I0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Yjefn3F6W8I0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Yjefn3F6W8I0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.98■■□□□ 1.59
Yjefn3F6W8I0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Yjefn3F6W8I0 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.93■■□□□ 1.58
Yjefn3F6W8I0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.85■■□□□ 1.57
Yjefn3F6W8I0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Yjefn3F6W8I0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.77■■□□□ 1.56
Yjefn3F6W8I0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Yjefn3F6W8I0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Yjefn3F6W8I0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Yjefn3F6W8I0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Yjefn3F6W8I0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Yjefn3F6W8I0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Yjefn3F6W8I0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Yjefn3F6W8I0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.51■■□□□ 1.51
Yjefn3F6W8I0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Yjefn3F6W8I0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Yjefn3F6W8I0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Yjefn3F6W8I0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Yjefn3F6W8I0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Yjefn3F6W8I0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.45■■□□□ 1.51
Yjefn3F6W8I0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.45■■□□□ 1.5
Yjefn3F6W8I0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Yjefn3F6W8I0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Yjefn3F6W8I0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Yjefn3F6W8I0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Yjefn3F6W8I0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Yjefn3F6W8I0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Yjefn3F6W8I0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Yjefn3F6W8I0 Rab21-202ENSMUST00000218831 843 ntBASIC24.27■■□□□ 1.48
Yjefn3F6W8I0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Yjefn3F6W8I0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.25■■□□□ 1.47
Yjefn3F6W8I0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms