Protein–RNA interactions for Protein: Q9CQC5

Cdc42ep3, Cdc42 effector protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep3Q9CQC5 Gm25239-201ENSMUST00000174915 86 ntBASIC36.86■■■■□ 3.49
Cdc42ep3Q9CQC5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Cdc42ep3Q9CQC5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Cdc42ep3Q9CQC5 Gm24109-201ENSMUST00000175489 103 ntBASIC32.32■■■□□ 2.76
Cdc42ep3Q9CQC5 Gm15042-201ENSMUST00000120212 883 ntBASIC31.6■■■□□ 2.65
Cdc42ep3Q9CQC5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Cdc42ep3Q9CQC5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cdc42ep3Q9CQC5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cdc42ep3Q9CQC5 Gm23366-201ENSMUST00000175022 89 ntBASIC30.75■■■□□ 2.51
Cdc42ep3Q9CQC5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cdc42ep3Q9CQC5 Gm15045-201ENSMUST00000117359 883 ntBASIC30.7■■■□□ 2.51
Cdc42ep3Q9CQC5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.34■■■□□ 2.45
Cdc42ep3Q9CQC5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
Cdc42ep3Q9CQC5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cdc42ep3Q9CQC5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cdc42ep3Q9CQC5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.93■■■□□ 2.38
Cdc42ep3Q9CQC5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cdc42ep3Q9CQC5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.45■■■□□ 2.31
Cdc42ep3Q9CQC5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cdc42ep3Q9CQC5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Cdc42ep3Q9CQC5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cdc42ep3Q9CQC5 Gm25238-201ENSMUST00000174914 89 ntBASIC29.27■■■□□ 2.28
Cdc42ep3Q9CQC5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
Cdc42ep3Q9CQC5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Cdc42ep3Q9CQC5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Cdc42ep3Q9CQC5 Gm25262-201ENSMUST00000174934 133 ntBASIC28.47■■■□□ 2.15
Cdc42ep3Q9CQC5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.31■■■□□ 2.12
Cdc42ep3Q9CQC5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cdc42ep3Q9CQC5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cdc42ep3Q9CQC5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
Cdc42ep3Q9CQC5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.17■■■□□ 2.1
Cdc42ep3Q9CQC5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.08■■■□□ 2.09
Cdc42ep3Q9CQC5 Gm26115-201ENSMUST00000175605 87 ntBASIC28.04■■■□□ 2.08
Cdc42ep3Q9CQC5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.04■■■□□ 2.08
Cdc42ep3Q9CQC5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cdc42ep3Q9CQC5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.95■■■□□ 2.06
Cdc42ep3Q9CQC5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Cdc42ep3Q9CQC5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cdc42ep3Q9CQC5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Cdc42ep3Q9CQC5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Cdc42ep3Q9CQC5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Cdc42ep3Q9CQC5 Gm8109-201ENSMUST00000194076 746 ntBASIC27.75■■■□□ 2.03
Cdc42ep3Q9CQC5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cdc42ep3Q9CQC5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Cdc42ep3Q9CQC5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.64■■■□□ 2.01
Cdc42ep3Q9CQC5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cdc42ep3Q9CQC5 Gm27325-201ENSMUST00000175467 74 ntBASIC27.54■■■□□ 2
Cdc42ep3Q9CQC5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.54■■■□□ 2
Cdc42ep3Q9CQC5 Rab21-202ENSMUST00000218831 843 ntBASIC27.51■■□□□ 1.99
Cdc42ep3Q9CQC5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cdc42ep3Q9CQC5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Cdc42ep3Q9CQC5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Cdc42ep3Q9CQC5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cdc42ep3Q9CQC5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.26■■□□□ 1.95
Cdc42ep3Q9CQC5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cdc42ep3Q9CQC5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.13■■□□□ 1.93
Cdc42ep3Q9CQC5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.13■■□□□ 1.93
Cdc42ep3Q9CQC5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdc42ep3Q9CQC5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.05■■□□□ 1.92
Cdc42ep3Q9CQC5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Cdc42ep3Q9CQC5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cdc42ep3Q9CQC5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cdc42ep3Q9CQC5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cdc42ep3Q9CQC5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cdc42ep3Q9CQC5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cdc42ep3Q9CQC5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cdc42ep3Q9CQC5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cdc42ep3Q9CQC5 Gm24804-201ENSMUST00000174982 85 ntBASIC26.75■■□□□ 1.87
Cdc42ep3Q9CQC5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.73■■□□□ 1.87
Cdc42ep3Q9CQC5 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.66■■□□□ 1.86
Cdc42ep3Q9CQC5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdc42ep3Q9CQC5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdc42ep3Q9CQC5 Psd-208ENSMUST00000224556 2034 ntBASIC26.53■■□□□ 1.84
Cdc42ep3Q9CQC5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.51■■□□□ 1.83
Cdc42ep3Q9CQC5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdc42ep3Q9CQC5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.48■■□□□ 1.83
Cdc42ep3Q9CQC5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Cdc42ep3Q9CQC5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cdc42ep3Q9CQC5 Gm27322-201ENSMUST00000184007 104 ntBASIC26.43■■□□□ 1.82
Cdc42ep3Q9CQC5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.43■■□□□ 1.82
Cdc42ep3Q9CQC5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.4■■□□□ 1.82
Cdc42ep3Q9CQC5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cdc42ep3Q9CQC5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdc42ep3Q9CQC5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cdc42ep3Q9CQC5 Zfp131-205ENSMUST00000223812 663 ntBASIC26.33■■□□□ 1.81
Cdc42ep3Q9CQC5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cdc42ep3Q9CQC5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cdc42ep3Q9CQC5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Cdc42ep3Q9CQC5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.26■■□□□ 1.79
Cdc42ep3Q9CQC5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cdc42ep3Q9CQC5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cdc42ep3Q9CQC5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cdc42ep3Q9CQC5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cdc42ep3Q9CQC5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.19■■□□□ 1.78
Cdc42ep3Q9CQC5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cdc42ep3Q9CQC5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.16■■□□□ 1.78
Cdc42ep3Q9CQC5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cdc42ep3Q9CQC5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Cdc42ep3Q9CQC5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.12■■□□□ 1.77
Cdc42ep3Q9CQC5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms