Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Gm25239-201ENSMUST00000174915 86 ntBASIC37.5■■■■□ 3.59
Rpusd1Q8VCZ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Rpusd1Q8VCZ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rpusd1Q8VCZ8 Gm15042-201ENSMUST00000120212 883 ntBASIC32.72■■■□□ 2.83
Rpusd1Q8VCZ8 Gm24109-201ENSMUST00000175489 103 ntBASIC32.53■■■□□ 2.8
Rpusd1Q8VCZ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpusd1Q8VCZ8 Gm15045-201ENSMUST00000117359 883 ntBASIC31.99■■■□□ 2.71
Rpusd1Q8VCZ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rpusd1Q8VCZ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rpusd1Q8VCZ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpusd1Q8VCZ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Rpusd1Q8VCZ8 Gm23366-201ENSMUST00000175022 89 ntBASIC31.33■■■□□ 2.61
Rpusd1Q8VCZ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rpusd1Q8VCZ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Rpusd1Q8VCZ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rpusd1Q8VCZ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpusd1Q8VCZ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.33■■■□□ 2.45
Rpusd1Q8VCZ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Rpusd1Q8VCZ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.19■■■□□ 2.42
Rpusd1Q8VCZ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.12■■■□□ 2.41
Rpusd1Q8VCZ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rpusd1Q8VCZ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
Rpusd1Q8VCZ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rpusd1Q8VCZ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rpusd1Q8VCZ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rpusd1Q8VCZ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpusd1Q8VCZ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rpusd1Q8VCZ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpusd1Q8VCZ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Rpusd1Q8VCZ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rpusd1Q8VCZ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.63■■■□□ 2.33
Rpusd1Q8VCZ8 Gm25238-201ENSMUST00000174914 89 ntBASIC29.61■■■□□ 2.33
Rpusd1Q8VCZ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpusd1Q8VCZ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpusd1Q8VCZ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.58■■■□□ 2.33
Rpusd1Q8VCZ8 Psd-208ENSMUST00000224556 2034 ntBASIC29.5■■■□□ 2.31
Rpusd1Q8VCZ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rpusd1Q8VCZ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
Rpusd1Q8VCZ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.04■■■□□ 2.24
Rpusd1Q8VCZ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rpusd1Q8VCZ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.87■■■□□ 2.21
Rpusd1Q8VCZ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rpusd1Q8VCZ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rpusd1Q8VCZ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpusd1Q8VCZ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.73■■■□□ 2.19
Rpusd1Q8VCZ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Rpusd1Q8VCZ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpusd1Q8VCZ8 Gm27325-201ENSMUST00000175467 74 ntBASIC28.66■■■□□ 2.18
Rpusd1Q8VCZ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpusd1Q8VCZ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.54■■■□□ 2.16
Rpusd1Q8VCZ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.52■■■□□ 2.16
Rpusd1Q8VCZ8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.41■■■□□ 2.14
Rpusd1Q8VCZ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rpusd1Q8VCZ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rpusd1Q8VCZ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.23■■■□□ 2.11
Rpusd1Q8VCZ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpusd1Q8VCZ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpusd1Q8VCZ8 Rab21-202ENSMUST00000218831 843 ntBASIC28.2■■■□□ 2.1
Rpusd1Q8VCZ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.19■■■□□ 2.1
Rpusd1Q8VCZ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rpusd1Q8VCZ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.12■■■□□ 2.09
Rpusd1Q8VCZ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28■■■□□ 2.07
Rpusd1Q8VCZ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Rpusd1Q8VCZ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rpusd1Q8VCZ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rpusd1Q8VCZ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
Rpusd1Q8VCZ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rpusd1Q8VCZ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.87■■■□□ 2.05
Rpusd1Q8VCZ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rpusd1Q8VCZ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Rpusd1Q8VCZ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Rpusd1Q8VCZ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpusd1Q8VCZ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.81■■■□□ 2.04
Rpusd1Q8VCZ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.79■■■□□ 2.04
Rpusd1Q8VCZ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rpusd1Q8VCZ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpusd1Q8VCZ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Rpusd1Q8VCZ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rpusd1Q8VCZ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rpusd1Q8VCZ8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.72■■■□□ 2.03
Rpusd1Q8VCZ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.7■■■□□ 2.03
Rpusd1Q8VCZ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rpusd1Q8VCZ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rpusd1Q8VCZ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpusd1Q8VCZ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpusd1Q8VCZ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Rpusd1Q8VCZ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rpusd1Q8VCZ8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.49■■□□□ 1.99
Rpusd1Q8VCZ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rpusd1Q8VCZ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.46■■□□□ 1.99
Rpusd1Q8VCZ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rpusd1Q8VCZ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.43■■□□□ 1.98
Rpusd1Q8VCZ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Rpusd1Q8VCZ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.37■■□□□ 1.97
Rpusd1Q8VCZ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rpusd1Q8VCZ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Rpusd1Q8VCZ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms