RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 J3QW42 95 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 PRF1P14222 555 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 SPNP16150 400 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF93P35789 620 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 ZBTB37Q5TC79 503 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 OR5L1Q8NGL2 311 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 SYNPRQ8TBG9 265 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 SLC25A38Q96DW6 304 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 S100A16Q96FQ6 103 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 OPA3Q9H6K4 179 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 CNTD2Q9H8S5 307 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 EIF3KQ9UBQ5 218 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 Q9UFV3 132 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 STARD10Q9Y365 291 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 RHBDD3Q9Y3P4 386 aa15.27■□□□□ 0.04
SHKBP1-224ENST00000600718 LAMA5O15230 3695 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 IGKV1-9A0A0C4DH69 117 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 OR5H1A6NKK0 313 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 A8MXE2 369 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 HCKP08631 526 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 ARSBP15848 533 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 IL32P24001 234 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 AZGP1P25311 298 aaKnown RBP15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 POU3F4P49335 361 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 IDH3GP51553 393 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 TNK1Q13470 666 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 UBE2V2Q15819 145 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 AGAP6Q5VW22 663 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 TMEM211Q6ICI0 200 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 PYHIN1Q6K0P9 492 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 CCBE1Q6UXH8 406 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 CDH20Q9HBT6 801 aa15.27■□□□□ 0.03
SHKBP1-224ENST00000600718 NGFP01138 241 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 IGKV3-15P01624 115 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 PSMB1P20618 241 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 WNT5AP41221 380 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 NKX2-5P52952 324 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 PITPNAQ00169 270 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 CARTPTQ16568 116 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 CLVS2Q5SYC1 327 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 RSBN1Q5VWQ0 802 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 TMEM42Q69YG0 159 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 PAQR4Q8N4S7 273 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 FAM169BQ8N8A8 192 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 ST6GALNAC3Q8NDV1 305 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 HAVCR1Q96D42 359 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 VKORC1Q9BQB6 163 aa15.26■□□□□ 0.03
SHKBP1-224ENST00000600718 A0A0G2JMP0 313 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 A0A0X1KG70 313 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 ICMTO60725 284 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 CCNKO75909 580 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 BMP5P22003 454 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 CASP6P55212 293 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 MADCAM1Q13477 382 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 GK2Q14410 553 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 BAK1Q16611 211 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 GDPD3Q7L5L3 318 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 MRPL21Q7Z2W9 205 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 MRGPRGQ86SM5 289 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 OR4M2Q8NGB6 313 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 OR4D6Q8NGJ1 314 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 SSC4DQ8WTU2 575 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 NKX3-1Q99801 234 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 C14orf119Q9NWQ9 140 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 SH3BGRL2Q9UJC5 107 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 ZNF221Q9UK13 617 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 IGF2RP11717 2491 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 ZNF816-ZNF321PA0A0X1KG74 233 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 ERVH48-1M5A8F1 160 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 GMDSO60547 372 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 AGFG2O95081 481 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 CELA3BP08861 270 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 TIMM23BQ5SRD1 257 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 Q8N402 240 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 DTX3Q8N9I9 347 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 SPSB1Q96BD6 273 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 PTTG3PQ9NZH4 202 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 SLC25A15Q9Y619 301 aa15.25■□□□□ 0.03
SHKBP1-224ENST00000600718 TMEM272A0A1B0GTI8 110 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 TPPPO94811 219 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 BPNT1O95861 308 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 NRASP01111 189 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 IL7P13232 177 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 PRKACBP22694 351 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 CNN3Q15417 329 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 MYPOPQ86VE0 399 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 ANGPTL5Q86XS5 388 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 ZNF101Q8IZC7 436 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 PTX4Q96A99 478 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 TECTBQ96PL2 329 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 GPR173Q9NS66 373 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 EEF1E1-BLOC1S5C9J1V9 151 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 LDLRAD4O15165 306 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 EEF1E1O43324 174 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 IGLV1-44P01699 117 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 CSF3P09919 207 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 LY6DQ14210 128 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 KISS1Q15726 138 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 KRT74Q7RTS7 529 aa15.24■□□□□ 0.03
SHKBP1-224ENST00000600718 RND1Q92730 232 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms