RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	BNA2	P47125	453 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	SUN4	P53616	420 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	COG8	Q04632	607 aa		4.85	□□□□□ -1.63
FDH2	YPL275W	CAB3	P36076	571 aa		4.84	□□□□□ -1.63
FDH2	YPL275W	RPP1	P38786	293 aa		4.84	□□□□□ -1.63
FDH2	YPL275W	MSE1	P48525	536 aa		4.84	□□□□□ -1.63
FDH2	YPL275W	TFB2	Q02939	513 aa		4.84	□□□□□ -1.63
FDH2	YPL275W	NOP14	Q99207	810 aa	Known RBP	4.84	□□□□□ -1.63
FDH2	YPL275W	SRB8	P25648	1427 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	RAD18	P10862	487 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	DOS2	P54858	310 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	PKH1	Q03407	766 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	CRR1	Q05790	422 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	YLR040C	Q07988	224 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	AIM39	Q08223	395 aa		4.83	□□□□□ -1.64
FDH2	YPL275W	HMG1	P12683	1054 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	RPL8A	P17076	256 aa	Known RBP	4.82	□□□□□ -1.64
FDH2	YPL275W	ERG4	P25340	473 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	YKR051W	P36142	418 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	KTR4	P38131	464 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	PCM1	P38628	557 aa	Known RBP	4.82	□□□□□ -1.64
FDH2	YPL275W	RPN10	P38886	268 aa	Known RBP	4.82	□□□□□ -1.64
FDH2	YPL275W	SLI1	P53304	468 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	NHX1	Q04121	633 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	ATG33	Q06485	197 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	Q0142	Q9ZZW4	58 aa		4.82	□□□□□ -1.64
FDH2	YPL275W	YBR053C	P38235	358 aa		4.81	□□□□□ -1.64
FDH2	YPL275W	ECM1	P39715	212 aa		4.81	□□□□□ -1.64
FDH2	YPL275W	FKH2	P41813	862 aa		4.81	□□□□□ -1.64
FDH2	YPL275W	MTR3	P48240	250 aa	Predicted RBP	4.81	□□□□□ -1.64
FDH2	YPL275W	YNL193W	P53870	558 aa		4.81	□□□□□ -1.64
FDH2	YPL275W	NRG1	Q03125	231 aa		4.81	□□□□□ -1.64
FDH2	YPL275W	SFL1	P20134	766 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	NGG1	P32494	702 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	HSL7	P38274	827 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	MIP6	P38760	659 aa	Known RBP	4.8	□□□□□ -1.64
FDH2	YPL275W	MGS1	P40151	587 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	ELO3	P40319	345 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	BUD21	Q08492	214 aa	Predicted RBP	4.8	□□□□□ -1.64
FDH2	YPL275W	TGL5	Q12043	749 aa		4.8	□□□□□ -1.64
FDH2	YPL275W	PDR5	P33302	1511 aa	Known RBP	4.79	□□□□□ -1.64
FDH2	YPL275W	CCR4	P31384	837 aa	Known RBP	4.79	□□□□□ -1.64
FDH2	YPL275W	YKR018C	P36114	725 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	YBR259W	P38338	688 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	FPR3	P38911	411 aa	Known RBP	4.79	□□□□□ -1.64
FDH2	YPL275W	YFL052W	P43551	465 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	MUP1	P50276	574 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	UBC9	P50623	157 aa	Predicted RBP	4.79	□□□□□ -1.64
FDH2	YPL275W	NPY1	P53164	384 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	UTP14	Q04500	899 aa	Known RBP	4.79	□□□□□ -1.64
FDH2	YPL275W	BCK1	Q01389	1478 aa		4.79	□□□□□ -1.64
FDH2	YPL275W	MET3	P08536	511 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	GID8	P40208	455 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	YJR142W	P47173	342 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	AIM14	P53109	570 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	PCL10	P53124	433 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	MET13	P53128	600 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	DNM1	P54861	757 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	ARP4	P80428	489 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	DLT1	Q04216	342 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	ADY4	Q05955	493 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	RPN7	Q06103	429 aa	Known RBP	4.78	□□□□□ -1.64
FDH2	YPL275W	YOL073C	Q08232	322 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	ATG11	Q12527	1178 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	PDR11	P40550	1411 aa		4.78	□□□□□ -1.64
FDH2	YPL275W	PPR1	P07272	904 aa	Predicted RBP	4.77	□□□□□ -1.65
FDH2	YPL275W	BAP3	P41815	604 aa		4.77	□□□□□ -1.65
FDH2	YPL275W	YRB30	P53107	440 aa	Predicted RBP	4.77	□□□□□ -1.65
FDH2	YPL275W	TEX1	P53851	422 aa	Known RBP	4.77	□□□□□ -1.65
FDH2	YPL275W	RNT1	Q02555	471 aa		4.77	□□□□□ -1.65
FDH2	YPL275W	FRE5	Q08908	694 aa		4.77	□□□□□ -1.65
FDH2	YPL275W	GIN4	Q12263	1142 aa		4.77	□□□□□ -1.65
FDH2	YPL275W	ALG7	P07286	448 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	LAT1	P12695	482 aa	Known RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	CAF20	P12962	161 aa	Known RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	ADE2	P21264	571 aa	Known RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	APL2	P36000	726 aa	Predicted RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	EBP2	P36049	427 aa	Known RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	HOS4	P40480	1083 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	YIR042C	P40586	236 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	PRP31	P49704	494 aa	Predicted RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	AMA1	P50082	593 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	ARG5,6	Q01217	863 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	HMO1	Q03973	246 aa	Known RBP	4.76	□□□□□ -1.65
FDH2	YPL275W	PNS1	Q12412	539 aa		4.76	□□□□□ -1.65
FDH2	YPL275W	ADR1	P07248	1323 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	SPC42	P36094	363 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	SUL1	P38359	859 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	CTF4	Q01454	927 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	MCM21	Q06675	368 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	DCS2	Q12123	353 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	KRE5	P22023	1365 aa		4.75	□□□□□ -1.65
FDH2	YPL275W	SFP1	P32432	683 aa		4.74	□□□□□ -1.65
FDH2	YPL275W	YHR112C	P38716	378 aa		4.74	□□□□□ -1.65
FDH2	YPL275W	DOT6	P40059	670 aa	Known RBP	4.74	□□□□□ -1.65
FDH2	YPL275W	BRE5	P53741	515 aa	Known RBP	4.74	□□□□□ -1.65
FDH2	YPL275W	RIA1	P53893	1110 aa		4.74	□□□□□ -1.65
FDH2	YPL275W	ORC4	P54791	529 aa		4.74	□□□□□ -1.65
FDH2	YPL275W	LEE1	Q02799	301 aa	Known RBP	4.74	□□□□□ -1.65
FDH2	YPL275W	OMS1	Q06668	471 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 121.7 ms