RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C THI73Q07904 523 aa3.59□□□□□ -1.83
LCB4YOR171C GPB1Q08886 897 aa3.59□□□□□ -1.83
LCB4YOR171C THI21Q08975 551 aa3.59□□□□□ -1.83
LCB4YOR171C DIF1O13577 133 aa3.58□□□□□ -1.84
LCB4YOR171C YKL100CP34248 587 aa3.58□□□□□ -1.84
LCB4YOR171C NUP120P35729 1037 aa3.58□□□□□ -1.84
LCB4YOR171C PCM1P38628 557 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C MNT3P40549 630 aa3.58□□□□□ -1.84
LCB4YOR171C URM1P40554 99 aaPredicted RBP3.58□□□□□ -1.84
LCB4YOR171C KEL2P50090 882 aa3.58□□□□□ -1.84
LCB4YOR171C PBP1P53297 722 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C DUS1P53759 423 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C YAP6Q03935 383 aa3.58□□□□□ -1.84
LCB4YOR171C ATG33Q06485 197 aa3.58□□□□□ -1.84
LCB4YOR171C YOR352WQ08816 343 aa3.58□□□□□ -1.84
LCB4YOR171C UPC2Q12151 913 aa3.58□□□□□ -1.84
LCB4YOR171C MPD2Q99316 277 aa3.58□□□□□ -1.84
LCB4YOR171C PRC1P00729 532 aa3.58□□□□□ -1.84
LCB4YOR171C GAS1P22146 559 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C STE14P32584 239 aa3.58□□□□□ -1.84
LCB4YOR171C ATG19P35193 415 aa3.58□□□□□ -1.84
LCB4YOR171C SAP190P36123 1033 aa3.58□□□□□ -1.84
LCB4YOR171C NOP4P37838 685 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C RRF1P38771 230 aa3.58□□□□□ -1.84
LCB4YOR171C SDP1P40479 209 aa3.58□□□□□ -1.84
LCB4YOR171C UBA2P52488 636 aa3.58□□□□□ -1.84
LCB4YOR171C PIP2P52960 996 aa3.58□□□□□ -1.84
LCB4YOR171C PUS2P53167 370 aa3.58□□□□□ -1.84
LCB4YOR171C PIL1P53252 339 aaKnown RBP3.58□□□□□ -1.84
LCB4YOR171C YPL277CQ08989 487 aa3.58□□□□□ -1.84
LCB4YOR171C NUP145P49687 1317 aa3.57□□□□□ -1.84
LCB4YOR171C RPS13P05756 151 aaKnown RBP3.57□□□□□ -1.84
LCB4YOR171C HIS5P07172 385 aa3.57□□□□□ -1.84
LCB4YOR171C CDC20P26309 610 aa3.57□□□□□ -1.84
LCB4YOR171C VMA8P32610 256 aaKnown RBP3.57□□□□□ -1.84
LCB4YOR171C PTH2P34222 208 aa3.57□□□□□ -1.84
LCB4YOR171C AIM3P38266 947 aaKnown RBP3.57□□□□□ -1.84
LCB4YOR171C CTF8P38877 133 aa3.57□□□□□ -1.84
LCB4YOR171C POP2P39008 433 aa3.57□□□□□ -1.84
LCB4YOR171C CHA4P43634 648 aa3.57□□□□□ -1.84
LCB4YOR171C PMT3P47190 753 aa3.57□□□□□ -1.84
LCB4YOR171C YML131WQ03102 365 aa3.57□□□□□ -1.84
LCB4YOR171C COG8Q04632 607 aa3.57□□□□□ -1.84
LCB4YOR171C RNH1Q04740 348 aa3.57□□□□□ -1.84
LCB4YOR171C ACK1Q07622 623 aaPredicted RBP3.57□□□□□ -1.84
LCB4YOR171C PGC1Q08959 321 aa3.57□□□□□ -1.84
LCB4YOR171C MED1Q12321 566 aa3.57□□□□□ -1.84
LCB4YOR171C APN1P22936 367 aa3.56□□□□□ -1.84
LCB4YOR171C NIP100P33420 868 aa3.56□□□□□ -1.84
LCB4YOR171C TRZ1P36159 838 aaPredicted RBP3.56□□□□□ -1.84
LCB4YOR171C SHR5P41912 237 aa3.56□□□□□ -1.84
LCB4YOR171C COG6P53959 839 aa3.56□□□□□ -1.84
LCB4YOR171C YNL034WP53963 612 aa3.56□□□□□ -1.84
LCB4YOR171C YNL018CP53976 612 aa3.56□□□□□ -1.84
LCB4YOR171C UME1Q03010 460 aa3.56□□□□□ -1.84
LCB4YOR171C NHX1Q04121 633 aa3.56□□□□□ -1.84
LCB4YOR171C SPN1Q06505 410 aaPredicted RBP3.56□□□□□ -1.84
LCB4YOR171C RXT3Q07458 294 aa3.56□□□□□ -1.84
LCB4YOR171C GUP2Q08929 609 aa3.56□□□□□ -1.84
LCB4YOR171C Q0142Q9ZZW4 58 aa3.56□□□□□ -1.84
LCB4YOR171C INO80P53115 1489 aa3.56□□□□□ -1.84
LCB4YOR171C SOD2P00447 233 aa3.56□□□□□ -1.84
LCB4YOR171C GAL1P04385 528 aa3.56□□□□□ -1.84
LCB4YOR171C CHS3P29465 1165 aa3.56□□□□□ -1.84
LCB4YOR171C MCM10P32354 571 aa3.56□□□□□ -1.84
LCB4YOR171C IME2P32581 645 aa3.56□□□□□ -1.84
LCB4YOR171C PXA2P34230 853 aa3.56□□□□□ -1.84
LCB4YOR171C RPN10P38886 268 aaKnown RBP3.56□□□□□ -1.84
LCB4YOR171C VPS41P38959 992 aa3.56□□□□□ -1.84
LCB4YOR171C TMA108P40462 946 aa3.56□□□□□ -1.84
LCB4YOR171C YJR096WP47137 282 aa3.56□□□□□ -1.84
LCB4YOR171C UBC9P50623 157 aaPredicted RBP3.56□□□□□ -1.84
LCB4YOR171C SPT20P50875 604 aa3.56□□□□□ -1.84
LCB4YOR171C OCA1P50946 238 aaPredicted RBP3.56□□□□□ -1.84
LCB4YOR171C ZIP2P53061 704 aa3.56□□□□□ -1.84
LCB4YOR171C NCS6P53088 359 aa3.56□□□□□ -1.84
LCB4YOR171C MET14Q02196 202 aa3.56□□□□□ -1.84
LCB4YOR171C CRR1Q05790 422 aa3.56□□□□□ -1.84
LCB4YOR171C GUD1Q07729 489 aa3.56□□□□□ -1.84
LCB4YOR171C PSR2Q07949 397 aa3.56□□□□□ -1.84
LCB4YOR171C NOP12Q08208 459 aaKnown RBP3.56□□□□□ -1.84
LCB4YOR171C YDR056CQ12025 205 aa3.56□□□□□ -1.84
LCB4YOR171C YLR149CQ99296 730 aa3.56□□□□□ -1.84
LCB4YOR171C PET111P08468 800 aa3.55□□□□□ -1.84
LCB4YOR171C RED1P14291 827 aa3.55□□□□□ -1.84
LCB4YOR171C GLK1P17709 500 aaKnown RBP3.55□□□□□ -1.84
LCB4YOR171C PGS1P25578 521 aa3.55□□□□□ -1.84
LCB4YOR171C IMP2'P32351 346 aa3.55□□□□□ -1.84
LCB4YOR171C TYS1P36421 394 aaKnown RBP3.55□□□□□ -1.84
LCB4YOR171C YBR071WP38243 211 aa3.55□□□□□ -1.84
LCB4YOR171C YHR078WP38799 552 aa3.55□□□□□ -1.84
LCB4YOR171C FUN12P39730 1002 aaKnown RBP3.55□□□□□ -1.84
LCB4YOR171C SGM1P47166 707 aa3.55□□□□□ -1.84
LCB4YOR171C PEX14P53112 341 aa3.55□□□□□ -1.84
LCB4YOR171C RIM8P53179 542 aa3.55□□□□□ -1.84
LCB4YOR171C YLR224WQ05947 369 aa3.55□□□□□ -1.84
LCB4YOR171C SWA2Q06677 668 aa3.55□□□□□ -1.84
LCB4YOR171C GPR1Q12361 961 aa3.55□□□□□ -1.84
LCB4YOR171C KCS1Q12494 1050 aa3.55□□□□□ -1.84
LCB4YOR171C TUF1P02992 437 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms