RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W MMS4P38257 691 aa9.05□□□□□ -0.96
SFL1YOR140W MAD1P40957 749 aa9.05□□□□□ -0.96
SFL1YOR140W ASG7P46993 209 aa9.05□□□□□ -0.96
SFL1YOR140W BNI4P53858 892 aa9.05□□□□□ -0.96
SFL1YOR140W BI2P03873 423 aa9.04□□□□□ -0.96
SFL1YOR140W BI4P03879 638 aa9.04□□□□□ -0.96
SFL1YOR140W WHI2P12611 486 aa9.04□□□□□ -0.96
SFL1YOR140W PRP9P19736 530 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W SPT5P27692 1063 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W CAP1P28495 268 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W GPI10P30777 616 aa9.04□□□□□ -0.96
SFL1YOR140W AFG3P39925 761 aa9.04□□□□□ -0.96
SFL1YOR140W INP51P40559 946 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W DAS1P47005 663 aa9.04□□□□□ -0.96
SFL1YOR140W RPC17P47076 161 aa9.04□□□□□ -0.96
SFL1YOR140W YGR111WP53265 400 aa9.04□□□□□ -0.96
SFL1YOR140W YOR059CQ08448 450 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W SLP1Q12232 587 aa9.04□□□□□ -0.96
SFL1YOR140W BI3Q9ZZW7 517 aa9.04□□□□□ -0.96
SFL1YOR140W BRF1P29056 596 aa9.04□□□□□ -0.96
SFL1YOR140W SEC21P32074 935 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W PSY2P40164 858 aa9.04□□□□□ -0.96
SFL1YOR140W DAK1P54838 584 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W SNU56Q03782 492 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W CDD1Q06549 142 aa9.04□□□□□ -0.96
SFL1YOR140W AIM41Q12032 185 aa9.04□□□□□ -0.96
SFL1YOR140W TIF6Q12522 245 aaKnown RBP9.04□□□□□ -0.96
SFL1YOR140W RIF1P29539 1916 aa9.04□□□□□ -0.96
SFL1YOR140W NAT1P12945 854 aaKnown RBP9.03□□□□□ -0.96
SFL1YOR140W KEX2P13134 814 aa9.03□□□□□ -0.96
SFL1YOR140W SWH1P35845 1188 aa9.03□□□□□ -0.96
SFL1YOR140W LAS1P36146 502 aaPredicted RBP9.03□□□□□ -0.96
SFL1YOR140W PBP2P38151 413 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
SFL1YOR140W SIT1P39980 628 aa9.03□□□□□ -0.96
SFL1YOR140W MVP1P40959 511 aaKnown RBP9.03□□□□□ -0.96
SFL1YOR140W PXR1P53335 271 aaPredicted RBP9.03□□□□□ -0.96
SFL1YOR140W YPR172WQ06608 200 aa9.03□□□□□ -0.96
SFL1YOR140W CDC8P00572 216 aa9.03□□□□□ -0.96
SFL1YOR140W PEX2P32800 271 aa9.03□□□□□ -0.96
SFL1YOR140W HOS2P53096 452 aaPredicted RBP9.03□□□□□ -0.96
SFL1YOR140W TDA9Q04545 1251 aa9.03□□□□□ -0.96
SFL1YOR140W RAD1P06777 1100 aa9.02□□□□□ -0.97
SFL1YOR140W GAL11P19659 1081 aa9.02□□□□□ -0.97
SFL1YOR140W CTK3P46963 296 aaPredicted RBP9.02□□□□□ -0.97
SFL1YOR140W JJJ3P47138 172 aa9.02□□□□□ -0.97
SFL1YOR140W STB4P50104 949 aa9.02□□□□□ -0.97
SFL1YOR140W ACM1Q08981 209 aa9.02□□□□□ -0.97
SFL1YOR140W SUT2Q12286 268 aa9.02□□□□□ -0.97
SFL1YOR140W MUD2P36084 527 aaKnown RBP9.02□□□□□ -0.97
SFL1YOR140W TDA3P38758 523 aa9.02□□□□□ -0.97
SFL1YOR140W BEM4P39011 633 aa9.02□□□□□ -0.97
SFL1YOR140W PUS2P53167 370 aa9.02□□□□□ -0.97
SFL1YOR140W MUK1Q02866 612 aa9.02□□□□□ -0.97
SFL1YOR140W YMR187CQ03236 431 aa9.02□□□□□ -0.97
SFL1YOR140W HFI1Q12060 488 aa9.02□□□□□ -0.97
SFL1YOR140W RPL17AP05740 184 aaKnown RBP9.01□□□□□ -0.97
SFL1YOR140W COX11P19516 300 aaKnown RBP9.01□□□□□ -0.97
SFL1YOR140W DBF4P32325 704 aa9.01□□□□□ -0.97
SFL1YOR140W MSS51P32335 436 aa9.01□□□□□ -0.97
SFL1YOR140W SEC6P32844 805 aa9.01□□□□□ -0.97
SFL1YOR140W YBL055CP34220 418 aaPredicted RBP9.01□□□□□ -0.97
SFL1YOR140W AGP2P38090 596 aa9.01□□□□□ -0.97
SFL1YOR140W RGD1P38339 666 aa9.01□□□□□ -0.97
SFL1YOR140W SAH1P39954 449 aaKnown RBP9.01□□□□□ -0.97
SFL1YOR140W MKT1P40850 830 aaKnown RBP9.01□□□□□ -0.97
SFL1YOR140W SGM1P47166 707 aa9.01□□□□□ -0.97
SFL1YOR140W RNT1Q02555 471 aa9.01□□□□□ -0.97
SFL1YOR140W YLR455WQ06188 304 aa9.01□□□□□ -0.97
SFL1YOR140W GAL10P04397 699 aa9□□□□□ -0.97
SFL1YOR140W TIM23P32897 222 aa9□□□□□ -0.97
SFL1YOR140W SKG6P32900 734 aaPredicted RBP9□□□□□ -0.97
SFL1YOR140W END3P39013 349 aa9□□□□□ -0.97
SFL1YOR140W GPD1Q00055 391 aaKnown RBP9□□□□□ -0.97
SFL1YOR140W YOR223WQ12015 292 aa9□□□□□ -0.97
SFL1YOR140W PUS1Q12211 544 aaKnown RBP9□□□□□ -0.97
SFL1YOR140W GLN3P18494 730 aa9□□□□□ -0.97
SFL1YOR140W PUF4P25339 888 aaKnown RBP RIP-Chip data9□□□□□ -0.97 RIP-Chip
SFL1YOR140W GPT2P36148 743 aa9□□□□□ -0.97
SFL1YOR140W QNS1P38795 714 aaKnown RBP9□□□□□ -0.97
SFL1YOR140W TMN3P40071 706 aa9□□□□□ -0.97
SFL1YOR140W YJR107WP47145 328 aa9□□□□□ -0.97
SFL1YOR140W NOG2P53742 486 aaKnown RBP9□□□□□ -0.97
SFL1YOR140W DOT1Q04089 582 aaKnown RBP9□□□□□ -0.97
SFL1YOR140W RAD10P06838 210 aa8.99□□□□□ -0.97
SFL1YOR140W RAD3P06839 778 aa8.99□□□□□ -0.97
SFL1YOR140W PSE1P32337 1089 aaKnown RBP8.99□□□□□ -0.97
SFL1YOR140W PSF2P40359 213 aa8.99□□□□□ -0.97
SFL1YOR140W ATG16Q03818 150 aa8.99□□□□□ -0.97
SFL1YOR140W UFO1Q04511 668 aa8.99□□□□□ -0.97
SFL1YOR140W ICL2Q12031 575 aa8.99□□□□□ -0.97
SFL1YOR140W SGT2Q12118 346 aaKnown RBP8.99□□□□□ -0.97
SFL1YOR140W RPS3P05750 240 aaKnown RBP8.99□□□□□ -0.97
SFL1YOR140W NUF2P33895 451 aa8.99□□□□□ -0.97
SFL1YOR140W SPC72P39723 622 aa8.99□□□□□ -0.97
SFL1YOR140W ALT1P52893 592 aa8.99□□□□□ -0.97
SFL1YOR140W NCS6P53088 359 aa8.99□□□□□ -0.97
SFL1YOR140W CUS1Q02554 436 aaPredicted RBP8.99□□□□□ -0.97
SFL1YOR140W CWC21Q03375 135 aaKnown RBP8.99□□□□□ -0.97
SFL1YOR140W YOR131CQ12486 218 aa8.99□□□□□ -0.97
SFL1YOR140W ARG4P04076 463 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms