RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C RIB2Q12362 591 aaKnown RBP5.05□□□□□ -1.6
VPS21YOR089C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
VPS21YOR089C Q0142Q9ZZW4 58 aa5.05□□□□□ -1.6
VPS21YOR089C SED4P25365 1065 aa5.04□□□□□ -1.6
VPS21YOR089C SDS22P36047 338 aa5.04□□□□□ -1.6
VPS21YOR089C ABZ1P37254 787 aaPredicted RBP5.04□□□□□ -1.6
VPS21YOR089C YHL041WP38730 149 aa5.04□□□□□ -1.6
VPS21YOR089C MIP6P38760 659 aaKnown RBP5.04□□□□□ -1.6
VPS21YOR089C SAW1P39735 261 aa5.04□□□□□ -1.6
VPS21YOR089C SDP1P40479 209 aa5.04□□□□□ -1.6
VPS21YOR089C SAP185P40856 1058 aa5.04□□□□□ -1.6
VPS21YOR089C YMR210WQ03649 449 aa5.04□□□□□ -1.6
VPS21YOR089C RPS21BQ3E754 87 aaKnown RBP5.04□□□□□ -1.6
VPS21YOR089C YCF1P39109 1515 aaKnown RBP5.03□□□□□ -1.6
VPS21YOR089C YOR1P53049 1477 aa5.03□□□□□ -1.6
VPS21YOR089C MMS22Q06164 1454 aa5.03□□□□□ -1.6
VPS21YOR089C CYC1P00044 109 aaPredicted RBP5.03□□□□□ -1.6
VPS21YOR089C SWI6P09959 803 aa5.03□□□□□ -1.6
VPS21YOR089C SSH4P32343 579 aa5.03□□□□□ -1.6
VPS21YOR089C APN2P38207 520 aa5.03□□□□□ -1.6
VPS21YOR089C SRP68P38687 599 aaKnown RBP5.03□□□□□ -1.6
VPS21YOR089C YDR132CQ03900 495 aa5.03□□□□□ -1.6
VPS21YOR089C RKR1Q04781 1562 aa5.03□□□□□ -1.6
VPS21YOR089C UFD4P33202 1483 aa5.02□□□□□ -1.61
VPS21YOR089C HOP1P20050 605 aa5.02□□□□□ -1.61
VPS21YOR089C APT2P36973 181 aa5.02□□□□□ -1.61
VPS21YOR089C TAF5P38129 798 aa5.02□□□□□ -1.61
VPS21YOR089C ACA1P39970 489 aa5.02□□□□□ -1.61
VPS21YOR089C SET2P46995 733 aaKnown RBP5.02□□□□□ -1.61
VPS21YOR089C CLU1Q03690 1277 aaKnown RBP5.02□□□□□ -1.61
VPS21YOR089C KCS1Q12494 1050 aa5.02□□□□□ -1.61
VPS21YOR089C TOP2P06786 1428 aaKnown RBP5.02□□□□□ -1.61
VPS21YOR089C BPT1P14772 1559 aa5.01□□□□□ -1.61
VPS21YOR089C MSH1P25846 959 aa5.01□□□□□ -1.61
VPS21YOR089C DGR2P32330 852 aa5.01□□□□□ -1.61
VPS21YOR089C PET309P32522 965 aaPredicted RBP5.01□□□□□ -1.61
VPS21YOR089C SAK1P38990 1142 aa5.01□□□□□ -1.61
VPS21YOR089C DUN1P39009 513 aa5.01□□□□□ -1.61
VPS21YOR089C BEM4P39011 633 aa5.01□□□□□ -1.61
VPS21YOR089C ASK10P48361 1146 aa5.01□□□□□ -1.61
VPS21YOR089C NOP15P53927 220 aaPredicted RBP5.01□□□□□ -1.61
VPS21YOR089C PKH1Q03407 766 aa5.01□□□□□ -1.61
VPS21YOR089C ECM38Q05902 660 aaPredicted RBP5.01□□□□□ -1.61
VPS21YOR089C SWM1Q12379 170 aa5.01□□□□□ -1.61
VPS21YOR089C GAL10P04397 699 aa5□□□□□ -1.61
VPS21YOR089C PRE10P21242 288 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VPS21YOR089C SER1P33330 395 aaKnown RBP5□□□□□ -1.61
VPS21YOR089C AKL1P38080 1108 aaKnown RBP5□□□□□ -1.61
VPS21YOR089C FAT1P38225 669 aa5□□□□□ -1.61
VPS21YOR089C YHR202WP38887 602 aa5□□□□□ -1.61
VPS21YOR089C ERP2P39704 215 aa5□□□□□ -1.61
VPS21YOR089C SSP120P39931 234 aaKnown RBP5□□□□□ -1.61
VPS21YOR089C URM1P40554 99 aaPredicted RBP5□□□□□ -1.61
VPS21YOR089C QRI7P43122 407 aa5□□□□□ -1.61
VPS21YOR089C MET12P46151 657 aa5□□□□□ -1.61
VPS21YOR089C BRE5P53741 515 aaKnown RBP5□□□□□ -1.61
VPS21YOR089C YLR407WQ06070 228 aa5□□□□□ -1.61
VPS21YOR089C TPO1Q07824 586 aa5□□□□□ -1.61
VPS21YOR089C PSF3Q12146 194 aa5□□□□□ -1.61
VPS21YOR089C YOL114CQ12322 202 aa5□□□□□ -1.61
VPS21YOR089C SMC4Q12267 1418 aa4.99□□□□□ -1.61
VPS21YOR089C RPS17AP02407 136 aaKnown RBP4.99□□□□□ -1.61
VPS21YOR089C RPS17BP14127 136 aaKnown RBP4.99□□□□□ -1.61
VPS21YOR089C PHO3P24031 467 aa4.99□□□□□ -1.61
VPS21YOR089C CTS1P29029 562 aa4.99□□□□□ -1.61
VPS21YOR089C DBF20P32328 564 aa4.99□□□□□ -1.61
VPS21YOR089C PPE1P38796 400 aa4.99□□□□□ -1.61
VPS21YOR089C STL1P39932 569 aa4.99□□□□□ -1.61
VPS21YOR089C VID28P40547 921 aa4.99□□□□□ -1.61
VPS21YOR089C IML2P47031 731 aa4.99□□□□□ -1.61
VPS21YOR089C EXG2P52911 562 aa4.99□□□□□ -1.61
VPS21YOR089C TEP1P53916 434 aa4.99□□□□□ -1.61
VPS21YOR089C ARP4P80428 489 aa4.99□□□□□ -1.61
VPS21YOR089C REC102Q02721 264 aa4.99□□□□□ -1.61
VPS21YOR089C PPN1Q04119 674 aa4.99□□□□□ -1.61
VPS21YOR089C SGD1Q06132 899 aa4.99□□□□□ -1.61
VPS21YOR089C ADY3Q07732 790 aa4.99□□□□□ -1.61
VPS21YOR089C CWC2Q12046 339 aaPredicted RBP4.99□□□□□ -1.61
VPS21YOR089C ARP7Q12406 477 aa4.99□□□□□ -1.61
VPS21YOR089C MYO4P32492 1471 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-LR1P0C2J3 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-FP0CX63 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-GR2P0CX64 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-CP25384 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-DR2Q03494 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY1B-DR1Q03855 1755 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-DR3Q07791 1770 aaKnown RBP4.99□□□□□ -1.61
VPS21YOR089C TY2B-OR1Q12113 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-DR1Q12472 1770 aa4.99□□□□□ -1.61
VPS21YOR089C TY2B-OR2Q12501 1770 aa4.99□□□□□ -1.61
VPS21YOR089C HIS5P07172 385 aa4.98□□□□□ -1.61
VPS21YOR089C MSS18P08593 268 aa4.98□□□□□ -1.61
VPS21YOR089C ACO1P19414 778 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
VPS21YOR089C MSM1P22438 575 aa4.98□□□□□ -1.61
VPS21YOR089C KTR4P38131 464 aa4.98□□□□□ -1.61
VPS21YOR089C YBR259WP38338 688 aa4.98□□□□□ -1.61
VPS21YOR089C VID27P40157 782 aa4.98□□□□□ -1.61
VPS21YOR089C YIL092WP40497 633 aa4.98□□□□□ -1.61
VPS21YOR089C FAF1P40546 346 aaPredicted RBP4.98□□□□□ -1.61
VPS21YOR089C MUS81Q04149 632 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms