RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W PIP2P52960 996 aa2.12□□□□□ -2.07
PRP39YML046W ATP23P53722 227 aa2.12□□□□□ -2.07
PRP39YML046W ARG5,6Q01217 863 aa2.12□□□□□ -2.07
PRP39YML046W REH1Q06709 432 aa2.12□□□□□ -2.07
PRP39YML046W ERG6P25087 383 aaKnown RBP2.11□□□□□ -2.07
PRP39YML046W PMT6P42934 759 aa2.11□□□□□ -2.07
PRP39YML046W YDL086WQ07505 273 aa2.11□□□□□ -2.07
PRP39YML046W NDD1Q08887 554 aa2.11□□□□□ -2.07
PRP39YML046W FRE7Q12333 620 aa2.11□□□□□ -2.07
PRP39YML046W LAM4P38800 1345 aa2.11□□□□□ -2.07
PRP39YML046W TUP1P16649 713 aa2.11□□□□□ -2.07
PRP39YML046W GET2P40056 285 aa2.11□□□□□ -2.07
PRP39YML046W ALR2P43553 858 aa2.11□□□□□ -2.07
PRP39YML046W YBR182C-AQ8TGU6 64 aa2.11□□□□□ -2.07
PRP39YML046W JHD1P40034 492 aa2.1□□□□□ -2.07
PRP39YML046W NMA2P53204 395 aa2.1□□□□□ -2.07
PRP39YML046W ARG7Q04728 441 aa2.1□□□□□ -2.07
PRP39YML046W DIF1O13577 133 aa2.09□□□□□ -2.07
PRP39YML046W AAD3P25612 363 aa2.09□□□□□ -2.07
PRP39YML046W PFD1P46988 109 aa2.09□□□□□ -2.07
PRP39YML046W HEM3P28789 327 aa2.09□□□□□ -2.08
PRP39YML046W STE5P32917 917 aa2.09□□□□□ -2.08
PRP39YML046W YHR097CP38809 366 aaKnown RBP2.09□□□□□ -2.08
PRP39YML046W ZDS1P50111 915 aaKnown RBP2.09□□□□□ -2.08
PRP39YML046W ORC4P54791 529 aa2.09□□□□□ -2.08
PRP39YML046W PRS5Q12265 496 aaKnown RBP2.09□□□□□ -2.08
PRP39YML046W RNR1P21524 888 aaKnown RBP2.08□□□□□ -2.08
PRP39YML046W PEX1P24004 1043 aa2.08□□□□□ -2.08
PRP39YML046W APL3P38065 1025 aa2.08□□□□□ -2.08
PRP39YML046W RLP7P40693 322 aaKnown RBP2.08□□□□□ -2.08
PRP39YML046W MAD1P40957 749 aa2.08□□□□□ -2.08
PRP39YML046W SNO3P43544 222 aa2.08□□□□□ -2.08
PRP39YML046W GYP8P43570 497 aa2.08□□□□□ -2.08
PRP39YML046W NMD5P46970 1048 aa2.08□□□□□ -2.08
PRP39YML046W YGR283CP53336 341 aaPredicted RBP2.08□□□□□ -2.08
PRP39YML046W YDR179W-AQ03983 463 aa2.08□□□□□ -2.08
PRP39YML046W HBN1Q96VH4 193 aa2.08□□□□□ -2.08
PRP39YML046W PRP28P23394 588 aa2.07□□□□□ -2.08
PRP39YML046W YEL1P34225 687 aa2.07□□□□□ -2.08
PRP39YML046W PIG2P40187 538 aa2.07□□□□□ -2.08
PRP39YML046W YDR514CQ04408 483 aa2.07□□□□□ -2.08
PRP39YML046W VPS36Q06696 566 aa2.07□□□□□ -2.08
PRP39YML046W PEX6P33760 1030 aa2.07□□□□□ -2.08
PRP39YML046W SLX1P38324 304 aa2.07□□□□□ -2.08
PRP39YML046W MET30P39014 640 aa2.07□□□□□ -2.08
PRP39YML046W ATG36P46983 293 aa2.07□□□□□ -2.08
PRP39YML046W NGL2Q03264 515 aaKnown RBP2.07□□□□□ -2.08
PRP39YML046W YTH1Q06102 208 aaPredicted RBP2.07□□□□□ -2.08
PRP39YML046W PIN2Q12057 282 aa2.07□□□□□ -2.08
PRP39YML046W CHS5Q12114 671 aaKnown RBP2.07□□□□□ -2.08
PRP39YML046W RKI1Q12189 258 aa2.07□□□□□ -2.08
PRP39YML046W RAD18P10862 487 aa2.06□□□□□ -2.08
PRP39YML046W MRPL9P31334 269 aa2.06□□□□□ -2.08
PRP39YML046W BCS1P32839 456 aa2.06□□□□□ -2.08
PRP39YML046W YBR184WP38299 523 aa2.06□□□□□ -2.08
PRP39YML046W SDS24P38314 527 aa2.06□□□□□ -2.08
PRP39YML046W BIT2P38346 545 aa2.06□□□□□ -2.08
PRP39YML046W REC102Q02721 264 aa2.06□□□□□ -2.08
PRP39YML046W RSC9Q03124 581 aa2.06□□□□□ -2.08
PRP39YML046W HMO1Q03973 246 aaKnown RBP2.06□□□□□ -2.08
PRP39YML046W YSH1Q06224 779 aaPredicted RBP2.06□□□□□ -2.08
PRP39YML046W CTP1P38152 299 aa2.05□□□□□ -2.08
PRP39YML046W UTP8P53276 713 aaKnown RBP2.05□□□□□ -2.08
PRP39YML046W UBX5Q06682 500 aa2.05□□□□□ -2.08
PRP39YML046W SPF1P39986 1215 aaKnown RBP2.05□□□□□ -2.08
PRP39YML046W MPS3P47069 682 aa2.05□□□□□ -2.08
PRP39YML046W YGL117WP53133 265 aa2.05□□□□□ -2.08
PRP39YML046W THI22Q06490 572 aa2.05□□□□□ -2.08
PRP39YML046W FMP25Q08023 583 aa2.05□□□□□ -2.08
PRP39YML046W DIA2Q08496 732 aaPredicted RBP2.05□□□□□ -2.08
PRP39YML046W NAP1P25293 417 aaKnown RBP2.04□□□□□ -2.08
PRP39YML046W DUN1P39009 513 aa2.04□□□□□ -2.08
PRP39YML046W UBP6P43593 499 aaKnown RBP2.04□□□□□ -2.08
PRP39YML046W HXT16P47185 567 aa2.04□□□□□ -2.08
PRP39YML046W CPR8P53728 308 aa2.04□□□□□ -2.08
PRP39YML046W TDA5Q06417 326 aaKnown RBP2.04□□□□□ -2.08
PRP39YML046W BUD7Q08754 746 aa2.04□□□□□ -2.08
PRP39YML046W NOP9P47077 666 aaKnown RBP2.03□□□□□ -2.08
PRP39YML046W DIP5P53388 608 aa2.03□□□□□ -2.08
PRP39YML046W ENT2Q05785 613 aa2.03□□□□□ -2.08
PRP39YML046W MET7Q08645 548 aa2.03□□□□□ -2.08
PRP39YML046W ECM3Q99252 613 aa2.03□□□□□ -2.08
PRP39YML046W ALY2P47029 1046 aa2.03□□□□□ -2.09
PRP39YML046W COX18P53239 316 aa2.03□□□□□ -2.09
PRP39YML046W UFO1Q04511 668 aa2.03□□□□□ -2.09
PRP39YML046W YDR338CQ05497 695 aa2.03□□□□□ -2.09
PRP39YML046W YPR089WO13585 888 aa2.02□□□□□ -2.09
PRP39YML046W LEU2P04173 364 aaPredicted RBP2.02□□□□□ -2.09
PRP39YML046W PHO2P07269 559 aa2.02□□□□□ -2.09
PRP39YML046W YAP1P19880 650 aaKnown RBP2.02□□□□□ -2.09
PRP39YML046W VBA3P25594 458 aa2.02□□□□□ -2.09
PRP39YML046W KHA1P40309 873 aa2.02□□□□□ -2.09
PRP39YML046W ERP6P53198 216 aa2.02□□□□□ -2.09
PRP39YML046W AAT1Q01802 451 aa2.02□□□□□ -2.09
PRP39YML046W ATP25Q03153 612 aa2.02□□□□□ -2.09
PRP39YML046W HER1Q12276 1246 aa2.02□□□□□ -2.09
PRP39YML046W CRC1Q12289 327 aa2.02□□□□□ -2.09
PRP39YML046W NUM1Q00402 2748 aa2.01□□□□□ -2.09
PRP39YML046W ERG20P08524 352 aaKnown RBP2.01□□□□□ -2.09
PRP39YML046W HEM1P09950 548 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms