RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C RFC3P38629 340 aa2.49□□□□□ -2.01
VPS13YLL040C IMA1P53051 589 aa2.49□□□□□ -2.01
VPS13YLL040C GTR1Q00582 310 aa2.49□□□□□ -2.01
VPS13YLL040C UME1Q03010 460 aa2.49□□□□□ -2.01
VPS13YLL040C AIM32Q04689 311 aa2.49□□□□□ -2.01
VPS13YLL040C YDR222WQ04925 415 aa2.49□□□□□ -2.01
VPS13YLL040C TRE1Q08919 783 aa2.49□□□□□ -2.01
VPS13YLL040C PGM1P33401 570 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C ECM2P38241 364 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C KAP123P40069 1113 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C FTR1P40088 404 aa2.49□□□□□ -2.01
VPS13YLL040C MEP1P40260 492 aa2.49□□□□□ -2.01
VPS13YLL040C TFB2Q02939 513 aa2.49□□□□□ -2.01
VPS13YLL040C SPE4Q12455 300 aa2.49□□□□□ -2.01
VPS13YLL040C CHO2P05374 869 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C RAD53P22216 821 aa2.49□□□□□ -2.01
VPS13YLL040C MSH3P25336 1018 aa2.49□□□□□ -2.01
VPS13YLL040C MRP4P32902 394 aa2.49□□□□□ -2.01
VPS13YLL040C UTP9P38882 575 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C SEC26P41810 973 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C DSE4P53753 1117 aa2.49□□□□□ -2.01
VPS13YLL040C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VPS13YLL040C YPL062WQ02781 134 aa2.49□□□□□ -2.01
VPS13YLL040C SAC6P32599 642 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C CCT7P42943 550 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C NOP13P53883 403 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VPS13YLL040C RPL34AP87262 121 aaPredicted RBP2.49□□□□□ -2.01
VPS13YLL040C SPP2Q02521 185 aa2.49□□□□□ -2.01
VPS13YLL040C RGA2Q06407 1009 aa2.49□□□□□ -2.01
VPS13YLL040C WHI4Q07655 649 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C SGT2Q12118 346 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C AI3P03877 415 aa2.49□□□□□ -2.01
VPS13YLL040C GPA2P10823 449 aa2.49□□□□□ -2.01
VPS13YLL040C TYR1P20049 452 aa2.49□□□□□ -2.01
VPS13YLL040C ATP7P30902 174 aa2.49□□□□□ -2.01
VPS13YLL040C CYS3P31373 394 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C TMT1P32643 299 aa2.49□□□□□ -2.01
VPS13YLL040C NGR1P32831 672 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C CSE1P33307 960 aa2.49□□□□□ -2.01
VPS13YLL040C TGL1P34163 548 aa2.49□□□□□ -2.01
VPS13YLL040C SIP2P34164 415 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C PIH1P38768 344 aa2.49□□□□□ -2.01
VPS13YLL040C CIT3P43635 486 aa2.49□□□□□ -2.01
VPS13YLL040C YDR090CQ03193 310 aa2.49□□□□□ -2.01
VPS13YLL040C SPH1Q06160 661 aa2.49□□□□□ -2.01
VPS13YLL040C CDC73Q06697 393 aa2.49□□□□□ -2.01
VPS13YLL040C IES3Q12345 250 aa2.49□□□□□ -2.01
VPS13YLL040C TUB2P02557 457 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C RAD1P06777 1100 aa2.48□□□□□ -2.01
VPS13YLL040C SEC1P30619 724 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C UTP11P34247 250 aaPredicted RBP2.48□□□□□ -2.01
VPS13YLL040C BAP2P38084 609 aa2.48□□□□□ -2.01
VPS13YLL040C PPS1P38148 807 aa2.48□□□□□ -2.01
VPS13YLL040C POP4P38336 279 aa2.48□□□□□ -2.01
VPS13YLL040C CCT2P39076 527 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C NOC2P39744 710 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C SET2P46995 733 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C AIM41Q12032 185 aa2.48□□□□□ -2.01
VPS13YLL040C MSH5Q12175 901 aa2.48□□□□□ -2.01
VPS13YLL040C PGA3Q12746 312 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C RAP1P11938 827 aa2.48□□□□□ -2.01
VPS13YLL040C DBP5P20449 482 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C YHR131CP38835 850 aa2.48□□□□□ -2.01
VPS13YLL040C DSS1P39112 969 aa2.48□□□□□ -2.01
VPS13YLL040C FAA2P39518 744 aa2.48□□□□□ -2.01
VPS13YLL040C MPC54Q08550 464 aa2.48□□□□□ -2.01
VPS13YLL040C FAP7Q12055 197 aaPredicted RBP2.48□□□□□ -2.01
VPS13YLL040C GCD2P12754 651 aaPredicted RBP2.48□□□□□ -2.01
VPS13YLL040C RIT1P23796 513 aa2.48□□□□□ -2.01
VPS13YLL040C IRE1P32361 1115 aa2.48□□□□□ -2.01
VPS13YLL040C STE13P33894 931 aa2.48□□□□□ -2.01
VPS13YLL040C MNN1P39106 762 aa2.48□□□□□ -2.01
VPS13YLL040C JJJ3P47138 172 aa2.48□□□□□ -2.01
VPS13YLL040C COG5P53951 403 aa2.48□□□□□ -2.01
VPS13YLL040C CDC42P19073 191 aa2.48□□□□□ -2.01
VPS13YLL040C CPR3P25719 182 aa2.48□□□□□ -2.01
VPS13YLL040C DYS1P38791 387 aa2.48□□□□□ -2.01
VPS13YLL040C ASG1P40467 964 aa2.48□□□□□ -2.01
VPS13YLL040C LAM5P43560 674 aa2.48□□□□□ -2.01
VPS13YLL040C EPL1P43572 832 aa2.48□□□□□ -2.01
VPS13YLL040C GUS1P46655 708 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
VPS13YLL040C PEX31P53203 462 aa2.48□□□□□ -2.01
VPS13YLL040C GRX3Q03835 250 aa2.48□□□□□ -2.01
VPS13YLL040C HFI1Q12060 488 aa2.48□□□□□ -2.01
VPS13YLL040C ATG11Q12527 1178 aa2.48□□□□□ -2.01
VPS13YLL040C YER152CP10356 443 aa2.48□□□□□ -2.01
VPS13YLL040C RPL8AP17076 256 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C TSR4P25040 408 aa2.48□□□□□ -2.01
VPS13YLL040C PDC6P26263 563 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C HEM12P32347 362 aaPredicted RBP2.48□□□□□ -2.01
VPS13YLL040C ARO8P53090 500 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C IRC4Q03036 179 aa2.48□□□□□ -2.01
VPS13YLL040C PRM6Q04705 352 aa2.48□□□□□ -2.01
VPS13YLL040C NSL1Q12143 216 aa2.48□□□□□ -2.01
VPS13YLL040C HOS1Q12214 470 aa2.48□□□□□ -2.01
VPS13YLL040C SPO16P17122 198 aa2.48□□□□□ -2.01
VPS13YLL040C SRB2P34162 210 aa2.48□□□□□ -2.01
VPS13YLL040C TFA2P36145 328 aa2.48□□□□□ -2.01
VPS13YLL040C KIC1P38692 1080 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms