RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C CDC33P07260 213 aaKnown RBP12.4□□□□□ -0.42
YKR040CYKR040C YBR056WP38081 501 aa12.4□□□□□ -0.42
YKR040CYKR040C RIM4P38741 713 aa12.4□□□□□ -0.42
YKR040CYKR040C SHQ1P40486 507 aaPredicted RBP12.4□□□□□ -0.42
YKR040CYKR040C VPS70P47161 811 aa12.4□□□□□ -0.42
YKR040CYKR040C LRE1P25579 583 aaKnown RBP12.39□□□□□ -0.43
YKR040CYKR040C PPZ1P26570 692 aa12.39□□□□□ -0.43
YKR040CYKR040C MET4P32389 672 aa12.39□□□□□ -0.43
YKR040CYKR040C DYS1P38791 387 aa12.39□□□□□ -0.43
YKR040CYKR040C MND1P53102 219 aa12.39□□□□□ -0.43
YKR040CYKR040C YLR287CQ05881 355 aa12.39□□□□□ -0.43
YKR040CYKR040C TRE1Q08919 783 aa12.39□□□□□ -0.43
YKR040CYKR040C PPR1P07272 904 aaPredicted RBP12.38□□□□□ -0.43
YKR040CYKR040C SAT4P25333 603 aaKnown RBP12.38□□□□□ -0.43
YKR040CYKR040C PEX34P25584 144 aa12.38□□□□□ -0.43
YKR040CYKR040C TSA1P34760 196 aaKnown RBP12.38□□□□□ -0.43
YKR040CYKR040C VFA1P40080 203 aa12.38□□□□□ -0.43
YKR040CYKR040C GPD1Q00055 391 aaKnown RBP12.38□□□□□ -0.43
YKR040CYKR040C YER152CP10356 443 aa12.37□□□□□ -0.43
YKR040CYKR040C KEX2P13134 814 aa12.37□□□□□ -0.43
YKR040CYKR040C TUP1P16649 713 aa12.37□□□□□ -0.43
YKR040CYKR040C YMC2P38087 329 aa12.37□□□□□ -0.43
YKR040CYKR040C HER2Q03557 464 aa12.37□□□□□ -0.43
YKR040CYKR040C FMP25Q08023 583 aa12.37□□□□□ -0.43
YKR040CYKR040C PHO13P19881 312 aa12.36□□□□□ -0.43
YKR040CYKR040C BET2P20133 325 aa12.36□□□□□ -0.43
YKR040CYKR040C CDC27P38042 758 aa12.36□□□□□ -0.43
YKR040CYKR040C RAD55P38953 406 aa12.36□□□□□ -0.43
YKR040CYKR040C VPS75P53853 264 aa12.36□□□□□ -0.43
YKR040CYKR040C UME1Q03010 460 aa12.36□□□□□ -0.43
YKR040CYKR040C YDR344CQ05510 147 aa12.36□□□□□ -0.43
YKR040CYKR040C SPE3Q12074 293 aaKnown RBP12.36□□□□□ -0.43
YKR040CYKR040C RRP6Q12149 733 aaKnown RBP12.36□□□□□ -0.43
YKR040CYKR040C JIP3O13555 125 aa12.35□□□□□ -0.43
YKR040CYKR040C IMG2P25642 146 aaPredicted RBP12.35□□□□□ -0.43
YKR040CYKR040C SPT5P27692 1063 aaKnown RBP12.35□□□□□ -0.43
YKR040CYKR040C TRZ1P36159 838 aaPredicted RBP12.35□□□□□ -0.43
YKR040CYKR040C PXL1P36166 706 aa12.35□□□□□ -0.43
YKR040CYKR040C RTT107P38850 1070 aa12.35□□□□□ -0.43
YKR040CYKR040C PFD1P46988 109 aa12.35□□□□□ -0.43
YKR040CYKR040C TAD1P53065 400 aa12.35□□□□□ -0.43
YKR040CYKR040C CEG1Q01159 459 aaPredicted RBP12.35□□□□□ -0.43
YKR040CYKR040C NSE5Q03718 556 aa12.35□□□□□ -0.43
YKR040CYKR040C SAM3Q08986 587 aa12.35□□□□□ -0.43
YKR040CYKR040C YOL098CQ12496 1037 aa12.35□□□□□ -0.43
YKR040CYKR040C RAM1P22007 431 aa12.34□□□□□ -0.43
YKR040CYKR040C EXO5P38289 585 aa12.34□□□□□ -0.43
YKR040CYKR040C BTT1P40314 149 aaPredicted RBP12.34□□□□□ -0.43
YKR040CYKR040C HXT8P40886 569 aa12.34□□□□□ -0.43
YKR040CYKR040C MMM1P41800 426 aa12.34□□□□□ -0.43
YKR040CYKR040C LSB6P42951 607 aa12.34□□□□□ -0.43
YKR040CYKR040C PHO86P46956 311 aa12.34□□□□□ -0.43
YKR040CYKR040C PSP1P50896 841 aaKnown RBP12.34□□□□□ -0.43
YKR040CYKR040C UTP8P53276 713 aaKnown RBP12.34□□□□□ -0.43
YKR040CYKR040C LEE1Q02799 301 aaKnown RBP12.34□□□□□ -0.43
YKR040CYKR040C RPS3P05750 240 aaKnown RBP12.33□□□□□ -0.44
YKR040CYKR040C VMA4P22203 233 aaKnown RBP12.33□□□□□ -0.44
YKR040CYKR040C YKR051WP36142 418 aa12.33□□□□□ -0.44
YKR040CYKR040C SFB3P38810 929 aa12.33□□□□□ -0.44
YKR040CYKR040C SMC2P38989 1170 aaKnown RBP12.33□□□□□ -0.44
YKR040CYKR040C GCN5Q03330 439 aa12.33□□□□□ -0.44
YKR040CYKR040C PML39Q03760 334 aa12.33□□□□□ -0.44
YKR040CYKR040C RCL1Q08096 367 aaPredicted RBP12.33□□□□□ -0.44
YKR040CYKR040C VPS54Q12071 889 aa12.33□□□□□ -0.44
YKR040CYKR040C ATG9Q12142 997 aa12.33□□□□□ -0.44
YKR040CYKR040C NBP2Q12163 236 aa12.33□□□□□ -0.44
YKR040CYKR040C NDJ1Q12366 352 aa12.33□□□□□ -0.44
YKR040CYKR040C TRP2P00899 507 aaKnown RBP12.32□□□□□ -0.44
YKR040CYKR040C RAD16P31244 790 aa12.32□□□□□ -0.44
YKR040CYKR040C GYP6P32806 458 aa12.32□□□□□ -0.44
YKR040CYKR040C COY1P34237 679 aa12.32□□□□□ -0.44
YKR040CYKR040C MIC60P36112 540 aa12.32□□□□□ -0.44
YKR040CYKR040C JNM1P36224 373 aa12.32□□□□□ -0.44
YKR040CYKR040C CBR1P38626 284 aaKnown RBP12.32□□□□□ -0.44
YKR040CYKR040C YAP5P40574 245 aa12.32□□□□□ -0.44
YKR040CYKR040C CDC1P40986 491 aa12.32□□□□□ -0.44
YKR040CYKR040C IES1P43579 692 aa12.32□□□□□ -0.44
YKR040CYKR040C GUF1P46943 645 aa12.32□□□□□ -0.44
YKR040CYKR040C ASG7P46993 209 aa12.32□□□□□ -0.44
YKR040CYKR040C HOP2P53187 214 aa12.32□□□□□ -0.44
YKR040CYKR040C MTD1Q02046 320 aaKnown RBP12.32□□□□□ -0.44
YKR040CYKR040C ARO80Q04052 950 aa12.32□□□□□ -0.44
YKR040CYKR040C DDC1Q08949 612 aa12.32□□□□□ -0.44
YKR040CYKR040C PDC6P26263 563 aaKnown RBP12.31□□□□□ -0.44
YKR040CYKR040C YKL097CP34245 136 aa12.31□□□□□ -0.44
YKR040CYKR040C YBL036CP38197 257 aa12.31□□□□□ -0.44
YKR040CYKR040C FHL1P39521 936 aa12.31□□□□□ -0.44
YKR040CYKR040C YEL075CP39972 122 aa12.31□□□□□ -0.44
YKR040CYKR040C AVT2P39981 480 aa12.31□□□□□ -0.44
YKR040CYKR040C RPT2P40327 437 aaKnown RBP12.31□□□□□ -0.44
YKR040CYKR040C MDM38Q08179 573 aa12.31□□□□□ -0.44
YKR040CYKR040C APC5Q08683 685 aa12.31□□□□□ -0.44
YKR040CYKR040C YPQ1Q12010 308 aa12.31□□□□□ -0.44
YKR040CYKR040C MTF1P14908 341 aaKnown RBP12.3□□□□□ -0.44
YKR040CYKR040C SPO12P17123 173 aa12.3□□□□□ -0.44
YKR040CYKR040C BCH2P36122 765 aa12.3□□□□□ -0.44
YKR040CYKR040C DSF2P38213 736 aa12.3□□□□□ -0.44
YKR040CYKR040C YBR225WP38321 900 aa12.3□□□□□ -0.44
YKR040CYKR040C QNS1P38795 714 aaKnown RBP12.3□□□□□ -0.44
YKR040CYKR040C YTA12P40341 825 aa12.3□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms