RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A PPZ2P33329 710 aa4.33□□□□□ -1.72
SFT1YKL006C-A PHO11P35842 467 aa4.33□□□□□ -1.72
SFT1YKL006C-A GLG1P36143 616 aa4.33□□□□□ -1.72
SFT1YKL006C-A APN2P38207 520 aa4.33□□□□□ -1.72
SFT1YKL006C-A PCM1P38628 557 aaKnown RBP4.33□□□□□ -1.72
SFT1YKL006C-A PHO12P38693 467 aa4.33□□□□□ -1.72
SFT1YKL006C-A SET2P46995 733 aaKnown RBP4.33□□□□□ -1.72
SFT1YKL006C-A YNL193WP53870 558 aa4.33□□□□□ -1.72
SFT1YKL006C-A ARP4P80428 489 aa4.33□□□□□ -1.72
SFT1YKL006C-A SIR3P06701 978 aa4.32□□□□□ -1.72
SFT1YKL006C-A YPT53P36019 220 aa4.32□□□□□ -1.72
SFT1YKL006C-A CRP1P38845 465 aaKnown RBP4.32□□□□□ -1.72
SFT1YKL006C-A ARG2P40360 574 aa4.32□□□□□ -1.72
SFT1YKL006C-A LEE1Q02799 301 aaKnown RBP4.32□□□□□ -1.72
SFT1YKL006C-A GUD1Q07729 489 aa4.32□□□□□ -1.72
SFT1YKL006C-A ISA1Q07821 250 aaPredicted RBP4.32□□□□□ -1.72
SFT1YKL006C-A PEX1P24004 1043 aa4.31□□□□□ -1.72
SFT1YKL006C-A CCR4P31384 837 aaKnown RBP4.31□□□□□ -1.72
SFT1YKL006C-A RRP14P36080 434 aaKnown RBP4.31□□□□□ -1.72
SFT1YKL006C-A HRB1P38922 454 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SFT1YKL006C-A GET2P40056 285 aa4.31□□□□□ -1.72
SFT1YKL006C-A YNL195CP40168 261 aa4.31□□□□□ -1.72
SFT1YKL006C-A NOP9P47077 666 aaKnown RBP4.31□□□□□ -1.72
SFT1YKL006C-A TAH11P47112 604 aa4.31□□□□□ -1.72
SFT1YKL006C-A BFA1P47113 574 aa4.31□□□□□ -1.72
SFT1YKL006C-A MET13P53128 600 aa4.31□□□□□ -1.72
SFT1YKL006C-A ALG12P53730 551 aa4.31□□□□□ -1.72
SFT1YKL006C-A ATG4P53867 494 aa4.31□□□□□ -1.72
SFT1YKL006C-A LGE1Q02796 332 aaKnown RBP4.31□□□□□ -1.72
SFT1YKL006C-A CLF1Q12309 687 aaPredicted RBP4.31□□□□□ -1.72
SFT1YKL006C-A ECM3Q99252 613 aa4.31□□□□□ -1.72
SFT1YKL006C-A PEX2P32800 271 aa4.3□□□□□ -1.72
SFT1YKL006C-A CUE2P36075 443 aaKnown RBP4.3□□□□□ -1.72
SFT1YKL006C-A YKR075CP36155 307 aa4.3□□□□□ -1.72
SFT1YKL006C-A YHR202WP38887 602 aa4.3□□□□□ -1.72
SFT1YKL006C-A GID8P40208 455 aa4.3□□□□□ -1.72
SFT1YKL006C-A YIL166CP40445 542 aa4.3□□□□□ -1.72
SFT1YKL006C-A RSC8P43609 557 aaKnown RBP4.3□□□□□ -1.72
SFT1YKL006C-A BRE5P53741 515 aaKnown RBP4.3□□□□□ -1.72
SFT1YKL006C-A MLH3Q12083 715 aa4.3□□□□□ -1.72
SFT1YKL006C-A SUT2Q12286 268 aa4.3□□□□□ -1.72
SFT1YKL006C-A SEC15P22224 910 aa4.29□□□□□ -1.72
SFT1YKL006C-A SSZ1P38788 538 aaKnown RBP4.29□□□□□ -1.72
SFT1YKL006C-A ATF1P40353 525 aa4.29□□□□□ -1.72
SFT1YKL006C-A SDA1P53313 767 aaKnown RBP4.29□□□□□ -1.72
SFT1YKL006C-A RGC1Q06108 1083 aaKnown RBP4.29□□□□□ -1.72
SFT1YKL006C-A USV1Q12132 391 aa4.29□□□□□ -1.72
SFT1YKL006C-A NOP14Q99207 810 aaKnown RBP4.29□□□□□ -1.72
SFT1YKL006C-A AKL1P38080 1108 aaKnown RBP4.28□□□□□ -1.72
SFT1YKL006C-A MNN1P39106 762 aa4.28□□□□□ -1.72
SFT1YKL006C-A PIG2P40187 538 aa4.28□□□□□ -1.72
SFT1YKL006C-A FHN1P53279 174 aa4.28□□□□□ -1.72
SFT1YKL006C-A HMO1Q03973 246 aaKnown RBP4.28□□□□□ -1.72
SFT1YKL006C-A YLR001CQ07895 862 aa4.28□□□□□ -1.72
SFT1YKL006C-A VHS3Q08438 674 aa4.28□□□□□ -1.72
SFT1YKL006C-A TAF3Q12297 353 aa4.28□□□□□ -1.72
SFT1YKL006C-A TUB1P09733 447 aaKnown RBP4.27□□□□□ -1.73
SFT1YKL006C-A RPL8AP17076 256 aaKnown RBP4.27□□□□□ -1.73
SFT1YKL006C-A SPO11P23179 398 aa4.27□□□□□ -1.73
SFT1YKL006C-A BCS1P32839 456 aa4.27□□□□□ -1.73
SFT1YKL006C-A MAL31P38156 614 aa4.27□□□□□ -1.73
SFT1YKL006C-A RIX1P38883 763 aaPredicted RBP4.27□□□□□ -1.73
SFT1YKL006C-A CCT7P42943 550 aaKnown RBP4.27□□□□□ -1.73
SFT1YKL006C-A YJR039WP47107 1121 aa4.27□□□□□ -1.73
SFT1YKL006C-A APM1Q00776 475 aaPredicted RBP4.27□□□□□ -1.73
SFT1YKL006C-A ABF1P14164 731 aa4.26□□□□□ -1.73
SFT1YKL006C-A THR1P17423 357 aaKnown RBP4.26□□□□□ -1.73
SFT1YKL006C-A BDH2P39713 417 aa4.26□□□□□ -1.73
SFT1YKL006C-A HLJ1P48353 224 aa4.26□□□□□ -1.73
SFT1YKL006C-A DNM1P54861 757 aa4.26□□□□□ -1.73
SFT1YKL006C-A DCS2Q12123 353 aa4.26□□□□□ -1.73
SFT1YKL006C-A BNR1P40450 1375 aa4.26□□□□□ -1.73
SFT1YKL006C-A ADR1P07248 1323 aa4.25□□□□□ -1.73
SFT1YKL006C-A ERG20P08524 352 aaKnown RBP4.25□□□□□ -1.73
SFT1YKL006C-A PRP28P23394 588 aa4.25□□□□□ -1.73
SFT1YKL006C-A GMH1P36125 273 aa4.25□□□□□ -1.73
SFT1YKL006C-A UBS1P38290 277 aa4.25□□□□□ -1.73
SFT1YKL006C-A BIT2P38346 545 aa4.25□□□□□ -1.73
SFT1YKL006C-A TDA3P38758 523 aa4.25□□□□□ -1.73
SFT1YKL006C-A NMD2P38798 1089 aaKnown RBP4.25□□□□□ -1.73
SFT1YKL006C-A NUG1P40010 520 aaKnown RBP4.25□□□□□ -1.73
SFT1YKL006C-A YGR151CP53287 111 aa4.25□□□□□ -1.73
SFT1YKL006C-A YMR210WQ03649 449 aa4.25□□□□□ -1.73
SFT1YKL006C-A UTP14Q04500 899 aaKnown RBP4.25□□□□□ -1.73
SFT1YKL006C-A THI22Q06490 572 aa4.25□□□□□ -1.73
SFT1YKL006C-A CHS5Q12114 671 aaKnown RBP4.25□□□□□ -1.73
SFT1YKL006C-A RPN13O13563 156 aa4.24□□□□□ -1.73
SFT1YKL006C-A RPS9BP05755 195 aaKnown RBP4.24□□□□□ -1.73
SFT1YKL006C-A KCC4P25389 1037 aa4.24□□□□□ -1.73
SFT1YKL006C-A ILV6P25605 309 aaKnown RBP4.24□□□□□ -1.73
SFT1YKL006C-A FUB1P25659 250 aa4.24□□□□□ -1.73
SFT1YKL006C-A MGS1P40151 587 aa4.24□□□□□ -1.73
SFT1YKL006C-A YIL077CP40508 320 aa4.24□□□□□ -1.73
SFT1YKL006C-A SPC98P53540 846 aa4.24□□□□□ -1.73
SFT1YKL006C-A VBA4Q04602 768 aaKnown RBP4.24□□□□□ -1.73
SFT1YKL006C-A VPS36Q06696 566 aa4.24□□□□□ -1.73
SFT1YKL006C-A YDL086WQ07505 273 aa4.24□□□□□ -1.73
SFT1YKL006C-A NDJ1Q12366 352 aa4.24□□□□□ -1.73
SFT1YKL006C-A POM34Q12445 299 aa4.24□□□□□ -1.73
SFT1YKL006C-A FRS1P15624 595 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms