RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W TFG1P41895 735 aaPredicted RBP9.46□□□□□ -0.9
LSB6YJL100W PCL10P53124 433 aa9.46□□□□□ -0.9
LSB6YJL100W NOG2P53742 486 aaKnown RBP9.46□□□□□ -0.9
LSB6YJL100W YNL144CP53907 740 aa9.46□□□□□ -0.9
LSB6YJL100W RPA49Q01080 415 aaPredicted RBP9.46□□□□□ -0.9
LSB6YJL100W DUS3Q06053 668 aaKnown RBP9.46□□□□□ -0.9
LSB6YJL100W TDA5Q06417 326 aaKnown RBP9.46□□□□□ -0.9
LSB6YJL100W PWP1P21304 576 aaKnown RBP9.45□□□□□ -0.9
LSB6YJL100W MGT1P26188 188 aa9.45□□□□□ -0.9
LSB6YJL100W SSE1P32589 693 aaKnown RBP9.45□□□□□ -0.9
LSB6YJL100W GYP6P32806 458 aa9.45□□□□□ -0.9
LSB6YJL100W SHP1P34223 423 aa9.45□□□□□ -0.9
LSB6YJL100W PHM6Q05637 104 aa9.45□□□□□ -0.9
LSB6YJL100W PUF3Q07807 879 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
LSB6YJL100W ISA1Q07821 250 aaPredicted RBP9.45□□□□□ -0.9
LSB6YJL100W TCP1P12612 559 aaKnown RBP9.45□□□□□ -0.9
LSB6YJL100W REC107P21651 314 aa9.45□□□□□ -0.9
LSB6YJL100W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
LSB6YJL100W BUD14P27637 709 aa9.45□□□□□ -0.9
LSB6YJL100W TRM2P33753 639 aa9.45□□□□□ -0.9
LSB6YJL100W PIN4P34217 668 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
LSB6YJL100W STN1P38960 494 aa9.45□□□□□ -0.9
LSB6YJL100W SUM1P46676 1062 aa9.45□□□□□ -0.9
LSB6YJL100W CPR7P47103 393 aa9.45□□□□□ -0.9
LSB6YJL100W TBF1Q02457 562 aa9.45□□□□□ -0.9
LSB6YJL100W ATP25Q03153 612 aa9.45□□□□□ -0.9
LSB6YJL100W RGA2Q06407 1009 aa9.45□□□□□ -0.9
LSB6YJL100W GCD2P12754 651 aaPredicted RBP9.44□□□□□ -0.9
LSB6YJL100W AEP2P22136 580 aa9.44□□□□□ -0.9
LSB6YJL100W DUG2P38149 878 aa9.44□□□□□ -0.9
LSB6YJL100W HSM3P38348 480 aa9.44□□□□□ -0.9
LSB6YJL100W HSH155P49955 971 aaKnown RBP9.44□□□□□ -0.9
LSB6YJL100W PTA1Q01329 785 aaPredicted RBP9.44□□□□□ -0.9
LSB6YJL100W SPO19Q03029 223 aa9.44□□□□□ -0.9
LSB6YJL100W YLR225CQ05948 407 aaKnown RBP9.44□□□□□ -0.9
LSB6YJL100W CDC53Q12018 815 aaKnown RBP9.44□□□□□ -0.9
LSB6YJL100W RNR1P21524 888 aaKnown RBP9.43□□□□□ -0.9
LSB6YJL100W CDC48P25694 835 aaKnown RBP9.43□□□□□ -0.9
LSB6YJL100W CSG2P35206 410 aa9.43□□□□□ -0.9
LSB6YJL100W POP4P38336 279 aa9.43□□□□□ -0.9
LSB6YJL100W YIL001WP40560 513 aa9.43□□□□□ -0.9
LSB6YJL100W BET4Q00618 327 aa9.43□□□□□ -0.9
LSB6YJL100W SLD5Q03406 294 aa9.43□□□□□ -0.9
LSB6YJL100W PPM1Q04081 328 aa9.43□□□□□ -0.9
LSB6YJL100W YMR027WQ04371 470 aa9.43□□□□□ -0.9
LSB6YJL100W NOC3Q07896 663 aaPredicted RBP9.43□□□□□ -0.9
LSB6YJL100W SRF1Q12516 437 aa9.43□□□□□ -0.9
LSB6YJL100W SFL1P20134 766 aa9.42□□□□□ -0.9
LSB6YJL100W VMA4P22203 233 aaKnown RBP9.42□□□□□ -0.9
LSB6YJL100W TKL1P23254 680 aaKnown RBP9.42□□□□□ -0.9
LSB6YJL100W RFC3P38629 340 aa9.42□□□□□ -0.9
LSB6YJL100W VPS29P38759 282 aa9.42□□□□□ -0.9
LSB6YJL100W MDJ2P42834 146 aa9.42□□□□□ -0.9
LSB6YJL100W PHO86P46956 311 aa9.42□□□□□ -0.9
LSB6YJL100W DUS1P53759 423 aaKnown RBP9.42□□□□□ -0.9
LSB6YJL100W COG6P53959 839 aa9.42□□□□□ -0.9
LSB6YJL100W SVF1Q05515 481 aa9.42□□□□□ -0.9
LSB6YJL100W ERP3Q12403 225 aa9.42□□□□□ -0.9
LSB6YJL100W TOM1Q03280 3268 aa9.42□□□□□ -0.9
LSB6YJL100W MRPL25P23369 157 aa9.42□□□□□ -0.9
LSB6YJL100W CLB4P24871 460 aa9.42□□□□□ -0.9
LSB6YJL100W ATG19P35193 415 aa9.42□□□□□ -0.9
LSB6YJL100W REG2P38232 338 aa9.42□□□□□ -0.9
LSB6YJL100W SPC97P38863 823 aa9.42□□□□□ -0.9
LSB6YJL100W PFK26P40433 827 aaKnown RBP9.42□□□□□ -0.9
LSB6YJL100W YML6P51998 286 aa9.42□□□□□ -0.9
LSB6YJL100W BI2P03873 423 aa9.41□□□□□ -0.9
LSB6YJL100W BI4P03879 638 aa9.41□□□□□ -0.9
LSB6YJL100W CBR1P38626 284 aaKnown RBP9.41□□□□□ -0.9
LSB6YJL100W ALY2P47029 1046 aa9.41□□□□□ -0.9
LSB6YJL100W YPT6Q99260 215 aa9.41□□□□□ -0.9
LSB6YJL100W BI3Q9ZZW7 517 aa9.41□□□□□ -0.9
LSB6YJL100W PMS1P14242 873 aa9.4□□□□□ -0.9
LSB6YJL100W CDC42P19073 191 aa9.4□□□□□ -0.9
LSB6YJL100W MRPS28P21771 286 aa9.4□□□□□ -0.9
LSB6YJL100W LIN1P38852 340 aaPredicted RBP9.4□□□□□ -0.9
LSB6YJL100W AIM21P40563 679 aa9.4□□□□□ -0.9
LSB6YJL100W INP52P50942 1183 aa9.4□□□□□ -0.9
LSB6YJL100W TAF6P53040 516 aa9.4□□□□□ -0.9
LSB6YJL100W UBP2Q01476 1272 aa9.4□□□□□ -0.9
LSB6YJL100W LGE1Q02796 332 aaKnown RBP9.4□□□□□ -0.9
LSB6YJL100W IWR1Q07532 353 aaPredicted RBP9.4□□□□□ -0.9
LSB6YJL100W YOR059CQ08448 450 aaKnown RBP9.4□□□□□ -0.9
LSB6YJL100W MSC6Q08818 692 aaKnown RBP9.4□□□□□ -0.9
LSB6YJL100W SEG2P34250 1132 aa9.4□□□□□ -0.91
LSB6YJL100W MXR1P40029 184 aa9.4□□□□□ -0.91
LSB6YJL100W TMN3P40071 706 aa9.4□□□□□ -0.91
LSB6YJL100W UBP15P50101 1230 aa9.4□□□□□ -0.91
LSB6YJL100W DRN1P53255 507 aaKnown RBP9.4□□□□□ -0.91
LSB6YJL100W OCA6Q12454 224 aa9.4□□□□□ -0.91
LSB6YJL100W VMA1P17255 1071 aaKnown RBP9.39□□□□□ -0.91
LSB6YJL100W MCM5P29496 775 aaKnown RBP9.39□□□□□ -0.91
LSB6YJL100W RGT1P32862 1170 aa9.39□□□□□ -0.91
LSB6YJL100W SMF2P38778 549 aa9.39□□□□□ -0.91
LSB6YJL100W DYS1P38791 387 aa9.39□□□□□ -0.91
LSB6YJL100W GTB1Q04924 702 aa9.39□□□□□ -0.91
LSB6YJL100W IVY1Q04934 453 aa9.39□□□□□ -0.91
LSB6YJL100W GPN2Q08726 347 aaPredicted RBP9.39□□□□□ -0.91
LSB6YJL100W YLR053CQ12026 108 aa9.39□□□□□ -0.91
LSB6YJL100W AI5_BETAQ9ZZX0 354 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms