RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W CCT5P40413 562 aaKnown RBP2.91□□□□□ -1.94
RPL40AYIL148W YJR120WP47157 116 aa2.91□□□□□ -1.94
RPL40AYIL148W RNR4P49723 345 aaKnown RBP2.91□□□□□ -1.94
RPL40AYIL148W SLD3P53135 668 aa2.91□□□□□ -1.94
RPL40AYIL148W COX18P53239 316 aa2.91□□□□□ -1.94
RPL40AYIL148W ASI2P53895 289 aa2.91□□□□□ -1.94
RPL40AYIL148W REC102Q02721 264 aa2.91□□□□□ -1.94
RPL40AYIL148W GAD1Q04792 585 aa2.91□□□□□ -1.94
RPL40AYIL148W SGO1Q08490 590 aa2.91□□□□□ -1.94
RPL40AYIL148W YPR027CQ12079 277 aa2.91□□□□□ -1.94
RPL40AYIL148W NDJ1Q12366 352 aa2.91□□□□□ -1.94
RPL40AYIL148W YLR415CO13578 112 aa2.9□□□□□ -1.95
RPL40AYIL148W MET3P08536 511 aa2.9□□□□□ -1.95
RPL40AYIL148W SEC65P29478 273 aa2.9□□□□□ -1.95
RPL40AYIL148W SEC21P32074 935 aaKnown RBP2.9□□□□□ -1.95
RPL40AYIL148W TRZ1P36159 838 aaPredicted RBP2.9□□□□□ -1.95
RPL40AYIL148W YHR202WP38887 602 aa2.9□□□□□ -1.95
RPL40AYIL148W DUN1P39009 513 aa2.9□□□□□ -1.95
RPL40AYIL148W SET2P46995 733 aaKnown RBP2.9□□□□□ -1.95
RPL40AYIL148W DAS1P47005 663 aa2.9□□□□□ -1.95
RPL40AYIL148W TIM44Q01852 431 aa2.9□□□□□ -1.95
RPL40AYIL148W ECM9Q02202 377 aa2.9□□□□□ -1.95
RPL40AYIL148W SKY1Q03656 742 aa2.9□□□□□ -1.95
RPL40AYIL148W DIA2Q08496 732 aaPredicted RBP2.9□□□□□ -1.95
RPL40AYIL148W YEF3P16521 1044 aaKnown RBP2.89□□□□□ -1.95
RPL40AYIL148W MIH1P23748 554 aa2.89□□□□□ -1.95
RPL40AYIL148W STE14P32584 239 aa2.89□□□□□ -1.95
RPL40AYIL148W TFC4P33339 1025 aa2.89□□□□□ -1.95
RPL40AYIL148W BIT2P38346 545 aa2.89□□□□□ -1.95
RPL40AYIL148W SSZ1P38788 538 aaKnown RBP2.89□□□□□ -1.95
RPL40AYIL148W YJR039WP47107 1121 aa2.89□□□□□ -1.95
RPL40AYIL148W ENP2P48234 707 aaKnown RBP2.89□□□□□ -1.95
RPL40AYIL148W AMA1P50082 593 aa2.89□□□□□ -1.95
RPL40AYIL148W COG6P53959 839 aa2.89□□□□□ -1.95
RPL40AYIL148W RNT1Q02555 471 aa2.89□□□□□ -1.95
RPL40AYIL148W CTK1Q03957 528 aaKnown RBP2.89□□□□□ -1.95
RPL40AYIL148W SND1Q04007 877 aa2.89□□□□□ -1.95
RPL40AYIL148W DLT1Q04216 342 aa2.89□□□□□ -1.95
RPL40AYIL148W PHM6Q05637 104 aa2.89□□□□□ -1.95
RPL40AYIL148W ISA1Q07821 250 aaPredicted RBP2.89□□□□□ -1.95
RPL40AYIL148W YOL057WQ08225 711 aa2.89□□□□□ -1.95
RPL40AYIL148W VHS3Q08438 674 aa2.89□□□□□ -1.95
RPL40AYIL148W SLX4Q12098 748 aa2.89□□□□□ -1.95
RPL40AYIL148W TRP4P07285 380 aaPredicted RBP2.88□□□□□ -1.95
RPL40AYIL148W ERG20P08524 352 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W TUB3P09734 445 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W PYC1P11154 1178 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W CAF20P12962 161 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W COX11P19516 300 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W PRP22P24384 1145 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W CTF13P35203 478 aa2.88□□□□□ -1.95
RPL40AYIL148W APL2P36000 726 aaPredicted RBP2.88□□□□□ -1.95
RPL40AYIL148W SIC1P38634 284 aa2.88□□□□□ -1.95
RPL40AYIL148W ECM1P39715 212 aa2.88□□□□□ -1.95
RPL40AYIL148W FKH2P41813 862 aa2.88□□□□□ -1.95
RPL40AYIL148W PEX8P53248 589 aa2.88□□□□□ -1.95
RPL40AYIL148W HOL1P53389 586 aa2.88□□□□□ -1.95
RPL40AYIL148W VBA4Q04602 768 aaKnown RBP2.88□□□□□ -1.95
RPL40AYIL148W YLR407WQ06070 228 aa2.88□□□□□ -1.95
RPL40AYIL148W MCM21Q06675 368 aa2.88□□□□□ -1.95
RPL40AYIL148W DCS2Q12123 353 aa2.88□□□□□ -1.95
RPL40AYIL148W RPS9BP05755 195 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W PPR1P07272 904 aaPredicted RBP2.87□□□□□ -1.95
RPL40AYIL148W ALG7P07286 448 aa2.87□□□□□ -1.95
RPL40AYIL148W MDM10P18409 493 aa2.87□□□□□ -1.95
RPL40AYIL148W ADE2P21264 571 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W DGR2P32330 852 aa2.87□□□□□ -1.95
RPL40AYIL148W YKU70P32807 602 aa2.87□□□□□ -1.95
RPL40AYIL148W OAF3P36023 863 aa2.87□□□□□ -1.95
RPL40AYIL148W AKL1P38080 1108 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W GPP2P40106 250 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W NIT2P47016 307 aa2.87□□□□□ -1.95
RPL40AYIL148W ARP4P80428 489 aa2.87□□□□□ -1.95
RPL40AYIL148W ARG5,6Q01217 863 aa2.87□□□□□ -1.95
RPL40AYIL148W PPN1Q04119 674 aa2.87□□□□□ -1.95
RPL40AYIL148W VMS1Q04311 632 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W HFI1Q12060 488 aa2.87□□□□□ -1.95
RPL40AYIL148W SUT2Q12286 268 aa2.87□□□□□ -1.95
RPL40AYIL148W ATG11Q12527 1178 aa2.87□□□□□ -1.95
RPL40AYIL148W RPS21BQ3E754 87 aaKnown RBP2.87□□□□□ -1.95
RPL40AYIL148W KIN82P25341 720 aa2.86□□□□□ -1.95
RPL40AYIL148W PLC1P32383 869 aa2.86□□□□□ -1.95
RPL40AYIL148W PET127P32606 800 aa2.86□□□□□ -1.95
RPL40AYIL148W NIC96P34077 839 aa2.86□□□□□ -1.95
RPL40AYIL148W YKL133CP36066 463 aa2.86□□□□□ -1.95
RPL40AYIL148W RIM4P38741 713 aa2.86□□□□□ -1.95
RPL40AYIL148W REV7P38927 245 aa2.86□□□□□ -1.95
RPL40AYIL148W NUG1P40010 520 aaKnown RBP2.86□□□□□ -1.95
RPL40AYIL148W ELO3P40319 345 aa2.86□□□□□ -1.95
RPL40AYIL148W TPM2P40414 161 aa2.86□□□□□ -1.95
RPL40AYIL148W SDS3P40505 327 aa2.86□□□□□ -1.95
RPL40AYIL148W YIR042CP40586 236 aa2.86□□□□□ -1.95
RPL40AYIL148W BRE5P53741 515 aaKnown RBP2.86□□□□□ -1.95
RPL40AYIL148W NOP15P53927 220 aaPredicted RBP2.86□□□□□ -1.95
RPL40AYIL148W SLU7Q02775 382 aaKnown RBP2.86□□□□□ -1.95
RPL40AYIL148W ASM4Q05166 528 aa2.86□□□□□ -1.95
RPL40AYIL148W PEX15Q08215 383 aa2.86□□□□□ -1.95
RPL40AYIL148W TGL5Q12043 749 aa2.86□□□□□ -1.95
RPL40AYIL148W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
RPL40AYIL148W APM4Q99186 491 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms