RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	RPL1A	P0CX43	217 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	RPL1B	P0CX44	217 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	DAL82	P21705	255 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	SRO9	P25567	434 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	YCL042W	P25572	119 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PXR1	YGR280C	FYV10	P40492	516 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	AVT1	P47082	602 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	NUP84	P52891	726 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	BNI5	P53890	448 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	SMD2	Q06217	110 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	BRE1	Q07457	700 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	RPN8	Q08723	338 aa	Known RBP	4.81	□□□□□ -1.64
PXR1	YGR280C	TAF10	Q12030	206 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	NDJ1	Q12366	352 aa		4.81	□□□□□ -1.64
PXR1	YGR280C	COX3	P00420	269 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	TAF13	P11747	167 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	PEP7	P32609	515 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	SAS3	P34218	831 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YBR056W	P38081	501 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	WSC4	P38739	605 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	CRG1	P38892	291 aa	RIP-Chip data	4.8	□□□□□ -1.64	not detected
PXR1	YGR280C	NUP60	P39705	539 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	SAH1	P39954	449 aa	Known RBP	4.8	□□□□□ -1.64
PXR1	YGR280C	YIL161W	P40449	235 aa	Known RBP	4.8	□□□□□ -1.64
PXR1	YGR280C	CUL3	P53202	744 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	MRPS35	P53292	345 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	RTT102	P53330	157 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YNL146W	P53906	100 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	TOF2	Q02208	771 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	HOS3	Q02959	697 aa	Known RBP	4.8	□□□□□ -1.64
PXR1	YGR280C	ENT2	Q05785	613 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YLR346C	Q06139	101 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YPR097W	Q06839	1073 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YDL057W	Q07379	328 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	YPL066W	Q12194	479 aa		4.8	□□□□□ -1.64
PXR1	YGR280C	RNR3	P21672	869 aa	Known RBP	4.79	□□□□□ -1.64
PXR1	YGR280C	PRR1	P28708	518 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	TSA1	P34760	196 aa	Known RBP	4.79	□□□□□ -1.64
PXR1	YGR280C	YKR051W	P36142	418 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	TGL4	P36165	910 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	SIF2	P38262	535 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	RPN10	P38886	268 aa	Known RBP	4.79	□□□□□ -1.64
PXR1	YGR280C	CCT3	P39077	534 aa	Known RBP	4.79	□□□□□ -1.64
PXR1	YGR280C	SUM1	P46676	1062 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	POL31	P46957	487 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	NPY1	P53164	384 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	COQ6	P53318	479 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	IES4	Q08561	116 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	YPL272C	Q08984	517 aa		4.79	□□□□□ -1.64
PXR1	YGR280C	MAK16	P10962	306 aa	Predicted RBP	4.78	□□□□□ -1.64
PXR1	YGR280C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
PXR1	YGR280C	GLY1	P37303	387 aa	Known RBP	4.78	□□□□□ -1.64
PXR1	YGR280C	UBS1	P38290	277 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	PFS1	P38872	237 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	FET5	P43561	622 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	COQ5	P49017	307 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	TDA7	P53882	636 aa	Predicted RBP	4.78	□□□□□ -1.64
PXR1	YGR280C	MFM1	Q02783	413 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	GCN5	Q03330	439 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	WAR1	Q03631	944 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	CSM3	Q04659	317 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	SHS1	Q07657	551 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	RKM5	Q12367	367 aa		4.78	□□□□□ -1.64
PXR1	YGR280C	RPL4A	P10664	362 aa	Known RBP	4.77	□□□□□ -1.65
PXR1	YGR280C	REV1	P12689	985 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	SLA2	P33338	968 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	TRM2	P33753	639 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	STE13	P33894	931 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	RPN3	P40016	523 aa	Known RBP	4.77	□□□□□ -1.65
PXR1	YGR280C	DSN1	P40568	576 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	NPA3	P47122	385 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	RPL4B	P49626	362 aa	Known RBP	4.77	□□□□□ -1.65
PXR1	YGR280C	SUN4	P53616	420 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	YNL108C	P53929	270 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	TRS130	Q03660	1102 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	PRM6	Q04705	352 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	BNA5	Q05979	453 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	ECM7	Q06200	448 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	YFT2	Q06676	274 aa		4.77	□□□□□ -1.65
PXR1	YGR280C	MET6	P05694	767 aa	Known RBP	4.76	□□□□□ -1.65
PXR1	YGR280C	SRD1	P09007	221 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	GSY1	P23337	708 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	KIP2	P28743	706 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	COT1	P32798	439 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	TBS1	P38114	1094 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	MMS4	P38257	691 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	GAA1	P39012	614 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	ATG32	P40458	529 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	RPL34B	P40525	121 aa	Known RBP	4.76	□□□□□ -1.65
PXR1	YGR280C	RSM10	Q03201	203 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	TIF35	Q04067	274 aa	Known RBP	4.76	□□□□□ -1.65
PXR1	YGR280C	OPI10	Q08202	246 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	APC11	Q12157	165 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	CTF3	Q12748	733 aa		4.76	□□□□□ -1.65
PXR1	YGR280C	ADE3	P07245	946 aa	Known RBP	4.75	□□□□□ -1.65
PXR1	YGR280C	TCP1	P12612	559 aa	Known RBP	4.75	□□□□□ -1.65
PXR1	YGR280C	DBP5	P20449	482 aa	Known RBP	4.75	□□□□□ -1.65
PXR1	YGR280C	ATG12	P38316	186 aa		4.75	□□□□□ -1.65
PXR1	YGR280C	SAK1	P38990	1142 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms