RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C YLR257WQ06146 321 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C IWR1Q07532 353 aaPredicted RBP2.37□□□□□ -2.03
UBR1YGR184C BMT6Q12291 365 aa2.37□□□□□ -2.03
UBR1YGR184C NSI1Q12457 570 aa2.37□□□□□ -2.03
UBR1YGR184C YBR182C-AQ8TGU6 64 aa2.37□□□□□ -2.03
UBR1YGR184C RFA1P22336 621 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C LCB1P25045 558 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C DGR2P32330 852 aa2.37□□□□□ -2.03
UBR1YGR184C YSC84P32793 468 aa2.37□□□□□ -2.03
UBR1YGR184C BEM3P32873 1128 aa2.37□□□□□ -2.03
UBR1YGR184C UGA2P38067 497 aa2.37□□□□□ -2.03
UBR1YGR184C APM3P38153 483 aa2.37□□□□□ -2.03
UBR1YGR184C BUD27P43573 796 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
UBR1YGR184C CEG1Q01159 459 aaPredicted RBP2.37□□□□□ -2.03
UBR1YGR184C CIA1Q05583 330 aa2.37□□□□□ -2.03
UBR1YGR184C HSH49Q99181 213 aaPredicted RBP2.37□□□□□ -2.03
UBR1YGR184C SES1P07284 462 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C REC107P21651 314 aa2.37□□□□□ -2.03
UBR1YGR184C PRP22P24384 1145 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C MF(ALPHA)2P32435 120 aa2.37□□□□□ -2.03
UBR1YGR184C KES1P35844 434 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C YBR284WP38150 797 aa2.37□□□□□ -2.03
UBR1YGR184C APN2P38207 520 aa2.37□□□□□ -2.03
UBR1YGR184C GPD2P41911 440 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C YGR045CP53229 120 aa2.37□□□□□ -2.03
UBR1YGR184C TY1A-DR2Q03964 440 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C TAF11Q04226 346 aa2.37□□□□□ -2.03
UBR1YGR184C RRP9Q06506 573 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C DED1P06634 604 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C FPS1P23900 669 aa2.37□□□□□ -2.03
UBR1YGR184C MCM3P24279 971 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C MSC7P38694 644 aa2.37□□□□□ -2.03
UBR1YGR184C GIC1P38785 314 aa2.37□□□□□ -2.03
UBR1YGR184C BST1P43571 1029 aa2.37□□□□□ -2.03
UBR1YGR184C YFR016CP43597 1233 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C GPI8P49018 411 aa2.37□□□□□ -2.03
UBR1YGR184C PEF1P53238 335 aa2.37□□□□□ -2.03
UBR1YGR184C YGR066CP53242 292 aa2.37□□□□□ -2.03
UBR1YGR184C BSC5P53755 489 aa2.37□□□□□ -2.03
UBR1YGR184C MCM21Q06675 368 aa2.37□□□□□ -2.03
UBR1YGR184C AAD4Q07747 329 aa2.37□□□□□ -2.03
UBR1YGR184C ATG11Q12527 1178 aa2.37□□□□□ -2.03
UBR1YGR184C SMC6Q12749 1114 aa2.37□□□□□ -2.03
UBR1YGR184C RPS9AO13516 197 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C KIN2P13186 1147 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C VPH1P32563 840 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C LAM1P38851 1228 aa2.37□□□□□ -2.03
UBR1YGR184C ROK1P45818 564 aaPredicted RBP2.37□□□□□ -2.03
UBR1YGR184C UPF3P48412 387 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C PSP2P50109 593 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C YMR265CQ03508 461 aaKnown RBP2.37□□□□□ -2.03
UBR1YGR184C YDR338CQ05497 695 aa2.37□□□□□ -2.03
UBR1YGR184C MET32Q12041 191 aa2.37□□□□□ -2.03
UBR1YGR184C OSW2Q12202 724 aa2.37□□□□□ -2.03
UBR1YGR184C SKM1Q12469 655 aa2.37□□□□□ -2.03
UBR1YGR184C SPO16P17122 198 aa2.36□□□□□ -2.03
UBR1YGR184C SGF29P25554 259 aa2.36□□□□□ -2.03
UBR1YGR184C PET127P32606 800 aa2.36□□□□□ -2.03
UBR1YGR184C YKL151CP36059 337 aa2.36□□□□□ -2.03
UBR1YGR184C RPN11P43588 306 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C ALT1P52893 592 aa2.36□□□□□ -2.03
UBR1YGR184C YML119WQ03208 357 aa2.36□□□□□ -2.03
UBR1YGR184C CLU1Q03690 1277 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C NMD4Q12129 218 aa2.36□□□□□ -2.03
UBR1YGR184C TCB1Q12466 1186 aa2.36□□□□□ -2.03
UBR1YGR184C ENT1Q12518 454 aa2.36□□□□□ -2.03
UBR1YGR184C FRD1P32614 470 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C SFA1P32771 386 aa2.36□□□□□ -2.03
UBR1YGR184C MIP6P38760 659 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C GIP2P40036 548 aa2.36□□□□□ -2.03
UBR1YGR184C UBP7P40453 1071 aa2.36□□□□□ -2.03
UBR1YGR184C EXG2P52911 562 aa2.36□□□□□ -2.03
UBR1YGR184C JJJ1P53863 590 aa2.36□□□□□ -2.03
UBR1YGR184C ATG23Q06671 453 aa2.36□□□□□ -2.03
UBR1YGR184C MLH2Q07980 695 aa2.36□□□□□ -2.03
UBR1YGR184C RCN2Q12044 265 aa2.36□□□□□ -2.03
UBR1YGR184C DCS2Q12123 353 aa2.36□□□□□ -2.03
UBR1YGR184C SEC53P07283 254 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C XDJ1P39102 459 aa2.36□□□□□ -2.03
UBR1YGR184C SWD1P39706 426 aa2.36□□□□□ -2.03
UBR1YGR184C YER010CP40011 234 aa2.36□□□□□ -2.03
UBR1YGR184C VPS4P52917 437 aa2.36□□□□□ -2.03
UBR1YGR184C RAI1P53063 387 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C SYF1Q04048 859 aaPredicted RBP2.36□□□□□ -2.03
UBR1YGR184C TDA9Q04545 1251 aa2.36□□□□□ -2.03
UBR1YGR184C ETT1Q08421 412 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C APL4Q12028 832 aa2.36□□□□□ -2.03
UBR1YGR184C DPH6Q12429 685 aa2.36□□□□□ -2.03
UBR1YGR184C DFR1P07807 211 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
UBR1YGR184C ADE2P21264 571 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C TYE7P33122 291 aaPredicted RBP2.36□□□□□ -2.03
UBR1YGR184C STE13P33894 931 aa2.36□□□□□ -2.03
UBR1YGR184C TDP1P38319 544 aa2.36□□□□□ -2.03
UBR1YGR184C YJL068CP40363 299 aa2.36□□□□□ -2.03
UBR1YGR184C FOL2P51601 243 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C ARC35P53731 342 aaKnown RBP2.36□□□□□ -2.03
UBR1YGR184C CSL4P53859 292 aaPredicted RBP2.36□□□□□ -2.03
UBR1YGR184C YKR011CQ02209 353 aa2.36□□□□□ -2.03
UBR1YGR184C GIS4Q04233 774 aa2.36□□□□□ -2.03
UBR1YGR184C RPS17AP02407 136 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms