RNA–Protein interactions for RNA: YDR507C

GIN4, Transcript of Protein kinase involved in bud growth and assembly of the septin ring, yeast

Gene GIN4, Length 3,429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIN4	YDR507C	RPL19A	P0CX82	189 aa	Known RBP	3	□□□□□ -1.93
GIN4	YDR507C	RPL19B	P0CX83	189 aa	Predicted RBP	3	□□□□□ -1.93
GIN4	YDR507C	MEF1	P25039	761 aa		3	□□□□□ -1.93
GIN4	YDR507C	RPN12	P32496	274 aa		3	□□□□□ -1.93
GIN4	YDR507C	PEX6	P33760	1030 aa		3	□□□□□ -1.93
GIN4	YDR507C	CTH1	P47976	325 aa		3	□□□□□ -1.93
GIN4	YDR507C	PEX19	Q07418	342 aa		3	□□□□□ -1.93
GIN4	YDR507C	RFA1	P22336	621 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	VBA3	P25594	458 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	PEP3	P27801	918 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
GIN4	YDR507C	SRP101	P32916	621 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	BMH2	P34730	273 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	NPA3	P47122	385 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	YJR142W	P47173	342 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	BMH1	P29311	267 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	SFP1	P32432	683 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	YKR078W	P36158	585 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	PXL1	P36166	706 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	POL12	P38121	705 aa	Predicted RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	CEP3	P40969	608 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	NIT3	P49954	291 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	PEX14	P53112	341 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	ENV7	Q12003	364 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	CEX1	Q12453	761 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	NOP14	Q99207	810 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	YBR238C	P38330	731 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	YKE2	P52553	114 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	CUE3	P53137	624 aa	Known RBP	2.99	□□□□□ -1.93
GIN4	YDR507C	TFB2	Q02939	513 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	UGO1	Q03327	502 aa		2.99	□□□□□ -1.93
GIN4	YDR507C	SRM1	P21827	482 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	PER1	P25625	357 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	SPC29	P33419	253 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	MAC1	P35192	417 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	MYO3	P36006	1272 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	YKT6	P36015	200 aa	Known RBP	2.98	□□□□□ -1.93
GIN4	YDR507C	ZRG8	P40021	1076 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	ENV11	P53246	860 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	YGR283C	P53336	341 aa	Predicted RBP	2.98	□□□□□ -1.93
GIN4	YDR507C	ROT1	Q03691	256 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	YOR352W	Q08816	343 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	SNF3	P10870	884 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	SWC3	P31376	625 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	PRX1	P34227	261 aa	Known RBP	2.98	□□□□□ -1.93
GIN4	YDR507C	RTS1	P38903	757 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	CCT5	P40413	562 aa	Known RBP	2.98	□□□□□ -1.93
GIN4	YDR507C	MSC2	Q03455	724 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	VPS64	Q03944	604 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	MET7	Q08645	548 aa		2.98	□□□□□ -1.93
GIN4	YDR507C	GAL10	P04397	699 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	MPH2	P0CD99	609 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	GSY1	P23337	708 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	EMC3	P36039	253 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RKM3	P38222	552 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	TOM71	P38825	639 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	RPN11	P43588	306 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	IRC8	P47046	822 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	GTF1	P53260	183 aa	Predicted RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	VPS20	Q04272	221 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	YDR514C	Q04408	483 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	YDL177C	Q12257	170 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	MDM12	Q92328	271 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	TUS1	Q06412	1307 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	CDC9	P04819	755 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RPL8A	P17076	256 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	DAL7	P21826	554 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	THI6	P41835	540 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	INP52	P50942	1183 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	YGR012W	P53206	393 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	DAM1	P53267	343 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RPS15	Q01855	142 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	UTP14	Q04500	899 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	RPS9A	O13516	197 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	MGM1	P32266	881 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	YKL222C	P35995	705 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	TFG2	P41896	400 aa	Predicted RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	STU2	P46675	888 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	GCV2	P49095	1034 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	VPS30	Q02948	557 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	MYO5	Q04439	1219 aa	Known RBP	2.97	□□□□□ -1.93
GIN4	YDR507C	SKG3	Q06315	1026 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RSC3	Q06639	885 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RAD61	Q99359	647 aa		2.97	□□□□□ -1.93
GIN4	YDR507C	RAD18	P10862	487 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	LCB1	P25045	558 aa	Known RBP	2.96	□□□□□ -1.94
GIN4	YDR507C	KRE2	P27809	442 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	RPC82	P32349	654 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	RPD3	P32561	433 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	LRG1	P35688	1017 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	SAP190	P36123	1033 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	BCD1	P38772	366 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	RAI1	P53063	387 aa	Known RBP	2.96	□□□□□ -1.94
GIN4	YDR507C	TAD1	P53065	400 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	YNL193W	P53870	558 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	ORC3	P54790	616 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	PKH1	Q03407	766 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	SIZ1	Q04195	904 aa		2.96	□□□□□ -1.94
GIN4	YDR507C	RPN7	Q06103	429 aa	Known RBP	2.96	□□□□□ -1.94
GIN4	YDR507C	PCL8	Q08966	492 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms