RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	WIP1	Q2V2P8	89 aa		4.69	□□□□□ -1.66
YDR261C-D	YDR261C-D	EFG1	Q3E705	233 aa	Known RBP	4.69	□□□□□ -1.66
YDR261C-D	YDR261C-D	SAR1	P20606	190 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	CSE1	P33307	960 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	MRX1	P40050	688 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SCC4	P40090	624 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	PCI8	P40512	444 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	YIR042C	P40586	236 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	AXL1	P40851	1208 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	CIR1	P42940	261 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	LYS4	P49367	693 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	NAN1	Q02931	896 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	ATG23	Q06671	453 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPP41	P38904	1435 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	HO	P09932	586 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	ART10	P18634	518 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	PYC2	P32327	1180 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	MSS1	P32559	526 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	RMA1	P36001	430 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	DIA4	P38705	446 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	PRE6	P40303	254 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	YFR006W	P43590	535 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	BSC5	P53755	489 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	RCM1	P53972	490 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SNU66	Q12420	587 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	APL1	P27351	700 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SNU114	P36048	1008 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	TGL4	P36165	910 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	MAK5	P38112	773 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SAK1	P38990	1142 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	DLD3	P39976	496 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPF1	P39986	1215 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SEC28	P40509	296 aa	Known RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	YJR107W	P47145	328 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	NSA1	P53136	463 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	EOS1	P53938	366 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	MRP51	Q02950	344 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	MED1	Q12321	566 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	SNU23	Q12368	194 aa	Predicted RBP	4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	HMS1	Q12398	434 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	YRF1-4	O13559	1382 aa		4.68	□□□□□ -1.66
YDR261C-D	YDR261C-D	COX6	P00427	148 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	ARG82	P07250	355 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	PDX1	P16451	410 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	CSM1	P25651	190 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	DGR2	P32330	852 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	STE5	P32917	917 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	RTC3	P38804	111 aa	Predicted RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	FYV10	P40492	516 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	AIM23	P47015	356 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	COG2	P53271	262 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	MAK10	Q02197	733 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	FAR8	Q05040	523 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	CDC53	Q12018	815 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	YEL077C	Q3E7X8	1277 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	RPP1A	P05318	106 aa	Predicted RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	NFT1	P0CE68	1218 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	YBL010C	P32788	280 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	FMP32	P43557	207 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	SIP4	P46954	829 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	RTT103	Q05543	409 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	UIP4	Q08926	304 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	YPR089W	O13585	888 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	TUB2	P02557	457 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	ARG4	P04076	463 aa	Predicted RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	PGI1	P12709	554 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	URA7	P28274	579 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	MKS1	P34072	584 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	RPN10	P38886	268 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	DTD1	Q07648	150 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	TRE1	Q08919	783 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	STH1	P32597	1359 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	CET1	O13297	549 aa	Predicted RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPT3	P06844	337 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	HMG1	P12683	1054 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	AAD3	P25612	363 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	NCL1	P38205	684 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	RAD55	P38953	406 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	NUP60	P39705	539 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	YJR030C	P47101	745 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPP2	Q02521	185 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	LAM6	Q08001	693 aa		4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	TMA46	Q12000	345 aa	Known RBP	4.67	□□□□□ -1.66
YDR261C-D	YDR261C-D	TEF1	P02994	458 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	RAD14	P28519	371 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	GYP6	P32806	458 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPP381	P38282	291 aa	Predicted RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	FLC2	P39719	783 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	HEF3	P53978	1044 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	SLU7	Q02775	382 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	ECM11	Q04110	302 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	YMR114C	Q04471	368 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	MFG1	Q07684	458 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	PUS9	Q12069	462 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	SRN2	Q99176	213 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	AI5_BETA	Q9ZZX0	354 aa		4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	SPT6	P23615	1451 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	RPL19A	P0CX82	189 aa	Known RBP	4.66	□□□□□ -1.66
YDR261C-D	YDR261C-D	RPL19B	P0CX83	189 aa	Predicted RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms