RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP15	YDR100W	OAF3	P36023	863 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	TRZ1	P36159	838 aa	Predicted RBP	4.27	□□□□□ -1.73
TVP15	YDR100W	FAT1	P38225	669 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	GPP2	P40106	250 aa	Known RBP	4.27	□□□□□ -1.73
TVP15	YDR100W	GID8	P40208	455 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	ELO3	P40319	345 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	NIT2	P47016	307 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	YMR210W	Q03649	449 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	TRM13	Q12383	476 aa		4.27	□□□□□ -1.73
TVP15	YDR100W	SWI6	P09959	803 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	RNR1	P21524	888 aa	Known RBP	4.26	□□□□□ -1.73
TVP15	YDR100W	ERG4	P25340	473 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	IMG2	P25642	146 aa	Predicted RBP	4.26	□□□□□ -1.73
TVP15	YDR100W	YKU70	P32807	602 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	TFC4	P33339	1025 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	DEF1	P35732	738 aa	Known RBP	4.26	□□□□□ -1.73
TVP15	YDR100W	GRX7	P38068	203 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	ENP1	P38333	483 aa	Known RBP	4.26	□□□□□ -1.73
TVP15	YDR100W	YNL195C	P40168	261 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	YIR042C	P40586	236 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	AMA1	P50082	593 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	PEX14	P53112	341 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	CTK1	Q03957	528 aa	Known RBP	4.26	□□□□□ -1.73
TVP15	YDR100W	VHS3	Q08438	674 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	SGO1	Q08490	590 aa		4.26	□□□□□ -1.73
TVP15	YDR100W	LAT1	P12695	482 aa	Known RBP	4.25	□□□□□ -1.73
TVP15	YDR100W	MTL1	P53214	551 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	NOP15	P53927	220 aa	Predicted RBP	4.25	□□□□□ -1.73
TVP15	YDR100W	KIN4	Q01919	800 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	SKY1	Q03656	742 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	YPR027C	Q12079	277 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	ATG11	Q12527	1178 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	APM4	Q99186	491 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	ECM3	Q99252	613 aa		4.25	□□□□□ -1.73
TVP15	YDR100W	HRP1	Q99383	534 aa	Known RBP	4.25	□□□□□ -1.73
TVP15	YDR100W	GLN4	P13188	809 aa	Known RBP	4.24	□□□□□ -1.73
TVP15	YDR100W	PLC1	P32383	869 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	SER1	P33330	395 aa	Known RBP	4.24	□□□□□ -1.73
TVP15	YDR100W	KTR4	P38131	464 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	YBR053C	P38235	358 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	BIT2	P38346	545 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	SUL1	P38359	859 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	DUN1	P39009	513 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	HOS4	P40480	1083 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	SPC105	P53148	917 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	HMO1	Q03973	246 aa	Known RBP	4.24	□□□□□ -1.73
TVP15	YDR100W	YPS7	Q06325	596 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	YLR040C	Q07988	224 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	FRE5	Q08908	694 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	PUS9	Q12069	462 aa		4.24	□□□□□ -1.73
TVP15	YDR100W	RPS17A	P02407	136 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	ALG7	P07286	448 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	RPS17B	P14127	136 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	FRS1	P15624	595 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	HCA4	P20448	770 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	PMI40	P29952	429 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	PET127	P32606	800 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	HIS7	P33734	552 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	LYS9	P38999	446 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	GET2	P40056	285 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	VID28	P40547	921 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	AIM21	P40563	679 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	NOP9	P47077	666 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	MSE1	P48525	536 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	RNR4	P49723	345 aa	Known RBP	4.23	□□□□□ -1.73
TVP15	YDR100W	PEX8	P53248	589 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	SLI1	P53304	468 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	RNT1	Q02555	471 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	VPS36	Q06696	566 aa		4.23	□□□□□ -1.73
TVP15	YDR100W	KAR1	P11927	433 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	COX11	P19516	300 aa	Known RBP	4.22	□□□□□ -1.73
TVP15	YDR100W	ATP12	P22135	325 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	BAP3	P41815	604 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	RSC8	P43609	557 aa	Known RBP	4.22	□□□□□ -1.73
TVP15	YDR100W	YJR008W	P47085	338 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	SLD3	P53135	668 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	RCR2	Q03446	210 aa	Known RBP	4.22	□□□□□ -1.73
TVP15	YDR100W	SND1	Q04007	877 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	ADY4	Q05955	493 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	DIA2	Q08496	732 aa	Predicted RBP	4.22	□□□□□ -1.73
TVP15	YDR100W	IRC13	Q08630	104 aa		4.22	□□□□□ -1.73
TVP15	YDR100W	ERG20	P08524	352 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	HEM12	P32347	362 aa	Predicted RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	MVD1	P32377	396 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	BCD1	P38772	366 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	FMO1	P38866	432 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	CCT3	P39077	534 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	NUP60	P39705	539 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	YJL163C	P46996	555 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	VBA4	Q04602	768 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	GSF2	Q04697	403 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	RGC1	Q06108	1083 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	STP4	Q07351	490 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	YOL073C	Q08232	322 aa		4.21	□□□□□ -1.74
TVP15	YDR100W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TVP15	YDR100W	TMA7	Q3E764	64 aa	Known RBP	4.21	□□□□□ -1.74
TVP15	YDR100W	PPR1	P07272	904 aa	Predicted RBP	4.2	□□□□□ -1.74
TVP15	YDR100W	CDC26	P14724	124 aa		4.2	□□□□□ -1.74
TVP15	YDR100W	PEX1	P24004	1043 aa		4.2	□□□□□ -1.74
TVP15	YDR100W	DGR2	P32330	852 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms