RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W TAD3Q9URQ3 322 aa5.57□□□□□ -1.52
SHR3YDL212W PYC1P11154 1178 aaKnown RBP5.56□□□□□ -1.52
SHR3YDL212W SFP1P32432 683 aa5.56□□□□□ -1.52
SHR3YDL212W SPC42P36094 363 aa5.56□□□□□ -1.52
SHR3YDL212W AKL1P38080 1108 aaKnown RBP5.56□□□□□ -1.52
SHR3YDL212W SFB3P38810 929 aa5.56□□□□□ -1.52
SHR3YDL212W NUG1P40010 520 aaKnown RBP5.56□□□□□ -1.52
SHR3YDL212W NOP9P47077 666 aaKnown RBP5.56□□□□□ -1.52
SHR3YDL212W APN2P38207 520 aa5.55□□□□□ -1.52
SHR3YDL212W QRI1P43123 477 aaKnown RBP5.55□□□□□ -1.52
SHR3YDL212W REC102Q02721 264 aa5.55□□□□□ -1.52
SHR3YDL212W MRH1Q12117 320 aaPredicted RBP5.55□□□□□ -1.52
SHR3YDL212W YKL033W-AQ86ZR7 236 aa5.55□□□□□ -1.52
SHR3YDL212W YHR202WP38887 602 aa5.54□□□□□ -1.52
SHR3YDL212W YJR096WP47137 282 aa5.54□□□□□ -1.52
SHR3YDL212W COX18P53239 316 aa5.54□□□□□ -1.52
SHR3YDL212W FHN1P53279 174 aa5.54□□□□□ -1.52
SHR3YDL212W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SHR3YDL212W REV7P38927 245 aa5.53□□□□□ -1.52
SHR3YDL212W BEM4P39011 633 aa5.53□□□□□ -1.52
SHR3YDL212W SMX3P54999 86 aaPredicted RBP5.53□□□□□ -1.52
SHR3YDL212W MLH3Q12083 715 aa5.53□□□□□ -1.52
SHR3YDL212W SUT2Q12286 268 aa5.53□□□□□ -1.52
SHR3YDL212W PEX1P24004 1043 aa5.52□□□□□ -1.53
SHR3YDL212W PHO11P35842 467 aa5.52□□□□□ -1.53
SHR3YDL212W UBS1P38290 277 aa5.52□□□□□ -1.53
SHR3YDL212W CBR1P38626 284 aaKnown RBP5.52□□□□□ -1.53
SHR3YDL212W PHO12P38693 467 aa5.52□□□□□ -1.53
SHR3YDL212W RSC8P43609 557 aaKnown RBP5.52□□□□□ -1.53
SHR3YDL212W HLJ1P48353 224 aa5.52□□□□□ -1.53
SHR3YDL212W SSL2Q00578 843 aa5.52□□□□□ -1.53
SHR3YDL212W UTP14Q04500 899 aaKnown RBP5.52□□□□□ -1.53
SHR3YDL212W THI22Q06490 572 aa5.52□□□□□ -1.53
SHR3YDL212W THI73Q07904 523 aa5.52□□□□□ -1.53
SHR3YDL212W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SHR3YDL212W IMG2P25642 146 aaPredicted RBP5.51□□□□□ -1.53
SHR3YDL212W CCT7P42943 550 aaKnown RBP5.51□□□□□ -1.53
SHR3YDL212W VPS36Q06696 566 aa5.51□□□□□ -1.53
SHR3YDL212W ISA1Q07821 250 aaPredicted RBP5.51□□□□□ -1.53
SHR3YDL212W THR1P17423 357 aaKnown RBP5.5□□□□□ -1.53
SHR3YDL212W SEC6P32844 805 aa5.5□□□□□ -1.53
SHR3YDL212W TYS1P36421 394 aaKnown RBP5.5□□□□□ -1.53
SHR3YDL212W CRP1P38845 465 aaKnown RBP5.5□□□□□ -1.53
SHR3YDL212W CKB2P38930 258 aa5.5□□□□□ -1.53
SHR3YDL212W YAP1802P53309 568 aa5.5□□□□□ -1.53
SHR3YDL212W PRP19P32523 503 aaKnown RBP5.49□□□□□ -1.53
SHR3YDL212W YPT7P32939 208 aa5.49□□□□□ -1.53
SHR3YDL212W NDC80P40460 691 aa5.49□□□□□ -1.53
SHR3YDL212W STU2P46675 888 aa5.49□□□□□ -1.53
SHR3YDL212W GPG1P53130 126 aa5.49□□□□□ -1.53
SHR3YDL212W YNR029CP53729 429 aaKnown RBP5.49□□□□□ -1.53
SHR3YDL212W RCR2Q03446 210 aaKnown RBP5.49□□□□□ -1.53
SHR3YDL212W MTQ2Q03920 221 aaPredicted RBP5.49□□□□□ -1.53
SHR3YDL212W ZRT2Q12436 422 aa5.49□□□□□ -1.53
SHR3YDL212W YKU70P32807 602 aa5.48□□□□□ -1.53
SHR3YDL212W BCS1P32839 456 aa5.48□□□□□ -1.53
SHR3YDL212W SET3P36124 751 aa5.48□□□□□ -1.53
SHR3YDL212W TDA3P38758 523 aa5.48□□□□□ -1.53
SHR3YDL212W RET2P43621 546 aa5.48□□□□□ -1.53
SHR3YDL212W GPD1Q00055 391 aaKnown RBP5.48□□□□□ -1.53
SHR3YDL212W YLR407WQ06070 228 aa5.48□□□□□ -1.53
SHR3YDL212W YGR161W-CQ3E744 92 aa5.48□□□□□ -1.53
SHR3YDL212W RPS21BQ3E754 87 aaKnown RBP5.48□□□□□ -1.53
SHR3YDL212W MAL31P38156 614 aa5.47□□□□□ -1.53
SHR3YDL212W TDP1P38319 544 aa5.47□□□□□ -1.53
SHR3YDL212W BIT2P38346 545 aa5.47□□□□□ -1.53
SHR3YDL212W FPR3P38911 411 aaKnown RBP5.47□□□□□ -1.53
SHR3YDL212W VPS73P53142 486 aaKnown RBP5.47□□□□□ -1.53
SHR3YDL212W YPS7Q06325 596 aa5.47□□□□□ -1.53
SHR3YDL212W USV1Q12132 391 aa5.47□□□□□ -1.53
SHR3YDL212W SWI6P09959 803 aa5.46□□□□□ -1.54
SHR3YDL212W FRS1P15624 595 aaKnown RBP5.46□□□□□ -1.54
SHR3YDL212W IME1P21190 360 aa5.46□□□□□ -1.54
SHR3YDL212W KIN3P22209 435 aa5.46□□□□□ -1.54
SHR3YDL212W HXT6P39003 570 aaKnown RBP5.46□□□□□ -1.54
SHR3YDL212W HXT7P39004 570 aa5.46□□□□□ -1.54
SHR3YDL212W YJL206CP39529 758 aa5.46□□□□□ -1.54
SHR3YDL212W UME1Q03010 460 aa5.46□□□□□ -1.54
SHR3YDL212W VHS3Q08438 674 aa5.46□□□□□ -1.54
SHR3YDL212W TAF3Q12297 353 aa5.46□□□□□ -1.54
SHR3YDL212W FEN2P25621 512 aaKnown RBP5.45□□□□□ -1.54
SHR3YDL212W YKR075CP36155 307 aa5.45□□□□□ -1.54
SHR3YDL212W CCT5P40413 562 aaKnown RBP5.45□□□□□ -1.54
SHR3YDL212W TAH11P47112 604 aa5.45□□□□□ -1.54
SHR3YDL212W YGR153WP48238 217 aa5.45□□□□□ -1.54
SHR3YDL212W RFX1P48743 811 aa5.45□□□□□ -1.54
SHR3YDL212W ECM9Q02202 377 aa5.45□□□□□ -1.54
SHR3YDL212W ERG20P08524 352 aaKnown RBP5.44□□□□□ -1.54
SHR3YDL212W PET127P32606 800 aa5.44□□□□□ -1.54
SHR3YDL212W YIL077CP40508 320 aa5.44□□□□□ -1.54
SHR3YDL212W GPP1P41277 250 aaKnown RBP5.44□□□□□ -1.54
SHR3YDL212W BIT61P47041 543 aa5.44□□□□□ -1.54
SHR3YDL212W ATG4P53867 494 aa5.44□□□□□ -1.54
SHR3YDL212W DIA2Q08496 732 aaPredicted RBP5.44□□□□□ -1.54
SHR3YDL212W CHS5Q12114 671 aaKnown RBP5.44□□□□□ -1.54
SHR3YDL212W POM34Q12445 299 aa5.44□□□□□ -1.54
SHR3YDL212W NUP145P49687 1317 aa5.44□□□□□ -1.54
SHR3YDL212W MSS1P32559 526 aaPredicted RBP5.43□□□□□ -1.54
SHR3YDL212W PIG2P40187 538 aa5.43□□□□□ -1.54
SHR3YDL212W ARG2P40360 574 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms