RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	TRZ1	P36159	838 aa	Predicted RBP	4.27	□□□□□ -1.73
YCL020W	YCL020W	APN2	P38207	520 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	TDA3	P38758	523 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	CKB2	P38930	258 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	ECM1	P39715	212 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	NOP9	P47077	666 aa	Known RBP	4.27	□□□□□ -1.73
YCL020W	YCL020W	GND2	P53319	492 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	CTK1	Q03957	528 aa	Known RBP	4.27	□□□□□ -1.73
YCL020W	YCL020W	HMO1	Q03973	246 aa	Known RBP	4.27	□□□□□ -1.73
YCL020W	YCL020W	TMN2	Q04562	672 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	OMS1	Q06668	471 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	MCH5	Q08777	521 aa		4.27	□□□□□ -1.73
YCL020W	YCL020W	FPR3	P38911	411 aa	Known RBP	4.26	□□□□□ -1.73
YCL020W	YCL020W	NUP60	P39705	539 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	FMP52	P40008	231 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	GID8	P40208	455 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	YGR153W	P48238	217 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	RCR2	Q03446	210 aa	Known RBP	4.26	□□□□□ -1.73
YCL020W	YCL020W	SGO1	Q08490	590 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	ACF2	Q12168	779 aa		4.26	□□□□□ -1.73
YCL020W	YCL020W	MTH1	P35198	433 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	APT2	P36973	181 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	MAL31	P38156	614 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	CBR1	P38626	284 aa	Known RBP	4.25	□□□□□ -1.73
YCL020W	YCL020W	CCT3	P39077	534 aa	Known RBP	4.25	□□□□□ -1.73
YCL020W	YCL020W	GPP1	P41277	250 aa	Known RBP	4.25	□□□□□ -1.73
YCL020W	YCL020W	YGR237C	P50089	785 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	UBA2	P52488	636 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	REC102	Q02721	264 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	YLR407W	Q06070	228 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	YPS7	Q06325	596 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	MLH3	Q12083	715 aa		4.25	□□□□□ -1.73
YCL020W	YCL020W	RPS21A	P0C0V8	87 aa	Known RBP	4.24	□□□□□ -1.73
YCL020W	YCL020W	DAL3	P32459	195 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	PHO11	P35842	467 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	PHO12	P38693	467 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	BEM4	P39011	633 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	RSC8	P43609	557 aa	Known RBP	4.24	□□□□□ -1.73
YCL020W	YCL020W	RET2	P43621	546 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	GPD1	Q00055	391 aa	Known RBP	4.24	□□□□□ -1.73
YCL020W	YCL020W	ECM9	Q02202	377 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	ATG11	Q12527	1178 aa		4.24	□□□□□ -1.73
YCL020W	YCL020W	YKU70	P32807	602 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	FAT1	P38225	669 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	YHL017W	P38745	532 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	HXT6	P39003	570 aa	Known RBP	4.23	□□□□□ -1.73
YCL020W	YCL020W	HXT7	P39004	570 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	YEN1	P40028	759 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	SDS3	P40505	327 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	TEL2	P53038	688 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	URN1	Q06525	465 aa	Known RBP	4.23	□□□□□ -1.73
YCL020W	YCL020W	FAP7	Q12055	197 aa	Predicted RBP	4.23	□□□□□ -1.73
YCL020W	YCL020W	YKL033W-A	Q86ZR7	236 aa		4.23	□□□□□ -1.73
YCL020W	YCL020W	YKR075C	P36155	307 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	OAF1	P39720	1047 aa	Predicted RBP	4.22	□□□□□ -1.73
YCL020W	YCL020W	DAS1	P47005	663 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	PMT3	P47190	753 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	THI22	Q06490	572 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	VHS3	Q08438	674 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	MRH1	Q12117	320 aa	Predicted RBP	4.22	□□□□□ -1.73
YCL020W	YCL020W	USV1	Q12132	391 aa		4.22	□□□□□ -1.73
YCL020W	YCL020W	SIR3	P06701	978 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	GLN4	P13188	809 aa	Known RBP	4.21	□□□□□ -1.73
YCL020W	YCL020W	PEX1	P24004	1043 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	BCS1	P32839	456 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	UBS1	P38290	277 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	REV7	P38927	245 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	UBP12	P39538	1254 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	RFX1	P48743	811 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	FHN1	P53279	174 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	RIA1	P53893	1110 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	DOS2	P54858	310 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	YMR210W	Q03649	449 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	YHM2	Q04013	314 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	HBT1	Q07653	1046 aa	Known RBP	4.21	□□□□□ -1.73
YCL020W	YCL020W	ZRT2	Q12436	422 aa		4.21	□□□□□ -1.73
YCL020W	YCL020W	FRS1	P15624	595 aa	Known RBP	4.21	□□□□□ -1.74
YCL020W	YCL020W	THR1	P17423	357 aa	Known RBP	4.21	□□□□□ -1.74
YCL020W	YCL020W	FEN2	P25621	512 aa	Known RBP	4.21	□□□□□ -1.74
YCL020W	YCL020W	SEC65	P29478	273 aa		4.21	□□□□□ -1.74
YCL020W	YCL020W	SET3	P36124	751 aa		4.21	□□□□□ -1.74
YCL020W	YCL020W	CCT5	P40413	562 aa	Known RBP	4.21	□□□□□ -1.74
YCL020W	YCL020W	YIL077C	P40508	320 aa		4.21	□□□□□ -1.74
YCL020W	YCL020W	SWI6	P09959	803 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	IME1	P21190	360 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	TSR4	P25040	408 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	OAF3	P36023	863 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	CCT7	P42943	550 aa	Known RBP	4.2	□□□□□ -1.74
YCL020W	YCL020W	YJR120W	P47157	116 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	NOP15	P53927	220 aa	Predicted RBP	4.2	□□□□□ -1.74
YCL020W	YCL020W	SMX3	P54999	86 aa	Predicted RBP	4.2	□□□□□ -1.74
YCL020W	YCL020W	SSL2	Q00578	843 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	TIM44	Q01852	431 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	STP4	Q07351	490 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	IRC10	Q08118	586 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	SUT2	Q12286	268 aa		4.2	□□□□□ -1.74
YCL020W	YCL020W	RPS17A	P02407	136 aa	Known RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	RPS17B	P14127	136 aa	Known RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	GRX4	P32642	244 aa		4.19	□□□□□ -1.74
YCL020W	YCL020W	YPT7	P32939	208 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms