RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	FAT1	P38225	669 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	GIP4	P39732	760 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	TAF1	P46677	1066 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	REC102	Q02721	264 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	ROT1	Q03691	256 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	YLR407W	Q06070	228 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	ADY3	Q07732	790 aa		5.06	□□□□□ -1.6
SHE3	YBR130C	RPS17A	P02407	136 aa	Known RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	HIS5	P07172	385 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	RPS17B	P14127	136 aa	Known RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	PHO3	P24031	467 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	MSH1	P25846	959 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	THI80	P35202	319 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	YBR259W	P38338	688 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	MEF2	P39677	819 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	SSP120	P39931	234 aa	Known RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	STL1	P39932	569 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	ACA1	P39970	489 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	VID28	P40547	921 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	QRI7	P43122	407 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	IML2	P47031	731 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	PRP31	P49704	494 aa	Predicted RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	EXG2	P52911	562 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	GTF1	P53260	183 aa	Predicted RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	BRE5	P53741	515 aa	Known RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	ASI2	P53895	289 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	ARP4	P80428	489 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	PLB2	Q03674	706 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	CWC2	Q12046	339 aa	Predicted RBP	5.05	□□□□□ -1.6
SHE3	YBR130C	PSF3	Q12146	194 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	UPC2	Q12151	913 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	YOL114C	Q12322	202 aa		5.05	□□□□□ -1.6
SHE3	YBR130C	GLN4	P13188	809 aa	Known RBP	5.04	□□□□□ -1.6
SHE3	YBR130C	PET309	P32522	965 aa	Predicted RBP	5.04	□□□□□ -1.6
SHE3	YBR130C	KTR4	P38131	464 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	PPE1	P38796	400 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	YIL092W	P40497	633 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	VHR1	P40522	640 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	PFA3	P42836	336 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	TEP1	P53916	434 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	GCN5	Q03330	439 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	PPN1	Q04119	674 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	MUS81	Q04149	632 aa	Predicted RBP	5.04	□□□□□ -1.6
SHE3	YBR130C	RXT3	Q07458	294 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	VHS3	Q08438	674 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	NUR1	Q12066	484 aa		5.04	□□□□□ -1.6
SHE3	YBR130C	RPS13	P05756	151 aa	Known RBP	5.03	□□□□□ -1.6
SHE3	YBR130C	MSS18	P08593	268 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SHE3	YBR130C	DBF20	P32328	564 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	PET127	P32606	800 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	ERP2	P39704	215 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	ECM1	P39715	212 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	FAF1	P40546	346 aa	Predicted RBP	5.03	□□□□□ -1.6
SHE3	YBR130C	RIM8	P53179	542 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	YDR132C	Q03900	495 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	OMS1	Q06668	471 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	MCM21	Q06675	368 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	WHI4	Q07655	649 aa	Known RBP	5.03	□□□□□ -1.6
SHE3	YBR130C	ISA1	Q07821	250 aa	Predicted RBP	5.03	□□□□□ -1.6
SHE3	YBR130C	NGL1	Q08213	363 aa	Known RBP	5.03	□□□□□ -1.6
SHE3	YBR130C	GPB1	Q08886	897 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	ARP7	Q12406	477 aa		5.03	□□□□□ -1.6
SHE3	YBR130C	YLR415C	O13578	112 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	SOD2	P00447	233 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	PYC1	P11154	1178 aa	Known RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	ATP12	P22135	325 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	MSM1	P22438	575 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	PRP22	P24384	1145 aa	Known RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	IMG2	P25642	146 aa	Predicted RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	APL2	P36000	726 aa	Predicted RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	AIM3	P38266	947 aa	Known RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	SPT20	P50875	604 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	NSE5	Q03718	556 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	DUS4	Q06063	367 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	BLS1	Q06071	122 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	NOP12	Q08208	459 aa	Known RBP	5.02	□□□□□ -1.61
SHE3	YBR130C	SGO1	Q08490	590 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	HMI1	Q12039	706 aa		5.02	□□□□□ -1.61
SHE3	YBR130C	SSM4	P40318	1319 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	ERG20	P08524	352 aa	Known RBP	5.01	□□□□□ -1.61
SHE3	YBR130C	TGL1	P34163	548 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	SIC1	P38634	284 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	CCT3	P39077	534 aa	Known RBP	5.01	□□□□□ -1.61
SHE3	YBR130C	VID27	P40157	782 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	IES1	P43579	692 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	VPS62	P53285	467 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	MTD1	Q02046	320 aa	Known RBP	5.01	□□□□□ -1.61
SHE3	YBR130C	VBA4	Q04602	768 aa	Known RBP	5.01	□□□□□ -1.61
SHE3	YBR130C	HIM1	Q06674	414 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	PEX19	Q07418	342 aa		5.01	□□□□□ -1.61
SHE3	YBR130C	ACK1	Q07622	623 aa	Predicted RBP	5.01	□□□□□ -1.61
SHE3	YBR130C	CDC6	P09119	513 aa		5	□□□□□ -1.61
SHE3	YBR130C	YEL076C-A	P0CX16	216 aa		5	□□□□□ -1.61
SHE3	YBR130C	YLR464W	P0CX17	216 aa		5	□□□□□ -1.61
SHE3	YBR130C	SEC15	P22224	910 aa		5	□□□□□ -1.61
SHE3	YBR130C	GFD2	P25370	566 aa	Known RBP	5	□□□□□ -1.61
SHE3	YBR130C	EMC1	P25574	760 aa		5	□□□□□ -1.61
SHE3	YBR130C	MF(ALPHA)2	P32435	120 aa		5	□□□□□ -1.61
SHE3	YBR130C	HXT4	P32467	576 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms